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GD18-4_B1_scaffold_560109

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_560109_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(3..557)
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BII5_9BACT
DedA family membrane protein
Tax=RBG_13_OP8X_37_8_curated
GD18-4_B1_scaffold_560109_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(557..1813)
-----------------
DNA (1257bp)
protein (419aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Aspartokinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKG5_SORCE
aspartokinase
GD18-4_B1_scaffold_560109_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1875..2066)
-----------------
DNA (192bp)
protein (64aa)
Transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XH88_SORCE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGP32477.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_560109_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2155..3861)
-----------------
DNA (1707bp)
protein (569aa)
Putative protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQW9_SORC5
protease
Putative protease {ECO:0000313|EMBL:CAN92197.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_560109_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3961..5373)
-----------------
DNA (1413bp)
protein (471aa)
pp2c2; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase {ECO:0000313|EMBL:CAN92199.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CAN92199.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Phosphoprotein phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQX8_SORC5
GD18-4_B1_scaffold_560109_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5370..6632)
-----------------
DNA (1263bp)
protein (421aa)
FHA domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQY3_SORC5
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:CAN92200.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_560109_7
unknown

Not on your lists

comp(6760..7575)
-----------------
DNA (816bp)
protein (272aa)

This feature has no annotations

GD18-4_B1_scaffold_560109_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7676..8047
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRW5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF01691.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_560109_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8060..9157)
-----------------
DNA (1098bp)
protein (366aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF01690.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_560109_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9157..10179)
-----------------
DNA (1023bp)
protein (341aa)
Threonine aldolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XGJ6_SORCE
threonine aldolase
Threonine aldolase {ECO:0000313|EMBL:AGP32247.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_560109_11
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10220..11179)
-----------------
DNA (960bp)
protein (320aa)
gyaR; glyoxylate reductase GyaR (EC:1.1.1.26)
Glyoxylate reductase GyaR {ECO:0000313|EMBL:AFR28984.1}; EC=1.1.1.26 {ECO:0000313|EMBL:AFR28984.1};; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
glyoxylate reductase n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI0003611FDE
GD18-4_B1_scaffold_560109_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11176..12498)
-----------------
DNA (1323bp)
protein (441aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA81_SORCE
hypothetical protein
GD18-4_B1_scaffold_560109_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13720)
-----------------
DNA (1212bp)
protein (404aa)
PulF protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH63_SORC5
pulF; hypothetical protein
PulF protein {ECO:0000313|EMBL:CAN96417.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_560109_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13746..14900
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH74_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96421.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_560109_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14905..15645)
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2J4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37103.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_560109_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15645..16220)
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV54_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37102.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_560109_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16678..17877
-----------------
DNA (1200bp)
protein (400aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK30_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33507.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_560109_18
unknown

Not on your lists

17905..18258
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

GD18-4_B1_scaffold_560109_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18280..19137
-----------------
DNA (858bp)
protein (286aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CAN96025.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Purine nucleoside phosphorylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8Q6_SORC5
deoD; hypothetical protein
GD18-4_B1_scaffold_560109_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19269..21401
-----------------
DNA (2133bp)
protein (711aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRE1_SORCE
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:EYF03456.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_560109_21
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

21445..22278
-----------------
DNA (834bp)
protein (278aa)
Cellulose synthase subunit BcsC n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QGU9_9CYAN
cellulose synthase subunit BcsC
Cellulose synthase subunit BcsC {ECO:0000313|EMBL:AGY58171.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
GD18-4_B1_scaffold_560109_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22365..22937)
-----------------
DNA (573bp)
protein (191aa)
Glutaredoxin NrdH {ECO:0000313|EMBL:AKF09574.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
glutaredoxin family protein id=4168206 bin=GWC2_Nitrospirae-rel_56_14 species=Pseudomonas sp. Lz4W genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
GD18-4_B1_scaffold_560109_23
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23091..23786
-----------------
DNA (696bp)
protein (232aa)
DNA alkylation repair enzyme n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RD92_9ACTO
DNA alkylation repair enzyme
DNA alkylation repair enzyme {ECO:0000313|EMBL:CCK31653.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
GD18-4_B1_scaffold_560109_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23810..24979)
-----------------
DNA (1170bp)
protein (390aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSQ5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02371.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_560109_25
unknown

Not on your lists

25221..25826
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

GD18-4_B1_scaffold_560109_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25827..27191)
-----------------
DNA (1365bp)
protein (455aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FRJ6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95300.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_560109_27
unknown

Not on your lists

comp(27188..27448)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

GD18-4_B1_scaffold_560109_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27511..29232
-----------------
DNA (1722bp)
protein (574aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Peptidase S49 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWN8_RUBXD
peptidase S49
GD18-4_B1_scaffold_560109_29
unknown

Not on your lists

29242..30531
-----------------
DNA (1290bp)
protein (430aa)

This feature has no annotations

GD18-4_B1_scaffold_560109_30
unknown

Not on your lists

comp(30627..31196)
-----------------
DNA (570bp)
protein (190aa)

This feature has no annotations

Displaying items 1-30 of 72 in total

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