ggKbase home page

GD18-4_B1_scaffold_601759

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_601759_1
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(1..549)
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WWY1_9CLOT
hypothetical protein
Tax=GWC1_Treponema_61_84_curated
GD18-4_B1_scaffold_601759_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(609..2834)
-----------------
DNA (2226bp)
protein (742aa)
Copper-exporting ATPase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIG0_SORCE
copper-exporting ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
GD18-4_B1_scaffold_601759_3
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3038..3529)
-----------------
DNA (492bp)
protein (164aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UY9_SOLUE
hemerythrin HHE cation binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ07473.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
GD18-4_B1_scaffold_601759_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3581..3964)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein id=12554369 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49171.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
GD18-4_B1_scaffold_601759_5
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3961..4194)
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein id=12554370 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV76084.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
GD18-4_B1_scaffold_601759_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4223..5038)
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein id=12554371 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
GD18-4_B1_scaffold_601759_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5035..6318)
-----------------
DNA (1284bp)
protein (428aa)
hypothetical protein id=12554373 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
GD18-4_B1_scaffold_601759_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6411..7778)
-----------------
DNA (1368bp)
protein (456aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI00037F1843
Fis family transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACY14894.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_601759_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7927..9549
-----------------
DNA (1623bp)
protein (541aa)
Putative uncharacterized protein n=1 Tax=Adineta vaga RepID=A5HC76_ADIVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYF08132.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_601759_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9697..10002
-----------------
DNA (306bp)
protein (102aa)
Putative cell surface protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAP1_SORC5
cell surface protein
Putative cell surface protein {ECO:0000313|EMBL:CAN92891.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_601759_11
unknown

Not on your lists

comp(10080..10910)
-----------------
DNA (831bp)
protein (277aa)

This feature has no annotations

GD18-4_B1_scaffold_601759_12
unknown

Not on your lists

comp(10991..11821)
-----------------
DNA (831bp)
protein (277aa)

This feature has no annotations

GD18-4_B1_scaffold_601759_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11890..13326)
-----------------
DNA (1437bp)
protein (479aa)
ABC1 family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZ24_SORC5
Ubiquinone biosynthesis monooxygenase UbiB {ECO:0000313|EMBL:EYF06888.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ABC1 family protein
GD18-4_B1_scaffold_601759_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13499..13933
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0Q4_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF06994.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_601759_15
unknown

Not on your lists

comp(14398..15555)
-----------------
DNA (1158bp)
protein (386aa)

This feature has no annotations

GD18-4_B1_scaffold_601759_16
unknown

Not on your lists

comp(15552..16721)
-----------------
DNA (1170bp)
protein (390aa)

This feature has no annotations

GD18-4_B1_scaffold_601759_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16724..17713)
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV51_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37097.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_601759_18
unknown

Not on your lists

comp(17716..17868)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

GD18-4_B1_scaffold_601759_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17871..19112)
-----------------
DNA (1242bp)
protein (414aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YAA1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41220.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_601759_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19246..19998
-----------------
DNA (753bp)
protein (251aa)
glutathione S-transferase n=1 Tax=Salinispora pacifica RepID=UPI00036FF7C7
SAM-dependent methyltransferase {ECO:0000313|EMBL:AKF05105.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_601759_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20048..20503
-----------------
DNA (456bp)
protein (152aa)
CheW protein n=1 Tax=Desulfovibrio africanus PCS RepID=M5PNV7_DESAF
CheW protein {ECO:0000313|EMBL:EYF04589.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CheW protein
GD18-4_B1_scaffold_601759_22
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20500..21807
-----------------
DNA (1308bp)
protein (436aa)
Protein-glutamate O-methyltransferase {ECO:0000313|EMBL:ABS26496.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ABS26496.1};; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Protein-glutamate O-methyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCQ0_ANADF
protein-glutamate O-methyltransferase
GD18-4_B1_scaffold_601759_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21804..22352
-----------------
DNA (549bp)
protein (183aa)
CheW protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLI9_GEOS8
Uncharacterized protein {ECO:0000313|EMBL:EYF04591.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CheW protein
GD18-4_B1_scaffold_601759_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22355..24154
-----------------
DNA (1800bp)
protein (600aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTR2_HALO1
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EYF04592.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
methyl-accepting chemotaxis sensory transducer
GD18-4_B1_scaffold_601759_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24158..26338
-----------------
DNA (2181bp)
protein (727aa)
CheA signal transduction histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTR1_HALO1
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EYF04593.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CheA signal transduction histidine kinase
GD18-4_B1_scaffold_601759_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26335..27399
-----------------
DNA (1065bp)
protein (355aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00070601}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00070601};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091M5_STIAD
GD18-4_B1_scaffold_601759_27
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27384..28586
-----------------
DNA (1203bp)
protein (401aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTQ9_HALO1
response regulator receiver sensor signal transduction histidine kinase
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACY15753.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_601759_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28691..30223
-----------------
DNA (1533bp)
protein (511aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FKG8_SORC5
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF02769.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_601759_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30220..32793
-----------------
DNA (2574bp)
protein (858aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVR9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36584.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_601759_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32790..34043
-----------------
DNA (1254bp)
protein (418aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FKG1_SORC5
Putative serine/threonine protein kinase {ECO:0000313|EMBL:EYF02767.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 30 items

View Taxonomy