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GD18-4_B1_scaffold_608877

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_608877_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(170..943)
-----------------
DNA (774bp)
protein (258aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYG2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36940.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_608877_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1015..1815)
-----------------
DNA (801bp)
protein (267aa)
PAS fold family id=1775401 bin=GWE2_Bacteroidetes_42_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
periplasmic sensor hybrid histidine kinase
Tax=GWF2_Bacteroidetes_43_11_curated
GD18-4_B1_scaffold_608877_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2055..2279
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMA7_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF07137.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_608877_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2353..3681
-----------------
DNA (1329bp)
protein (443aa)
ThrC protein {ECO:0000313|EMBL:CAN99379.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CAN99379.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Threonine synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDN5_SORC5
thrC; hypothetical protein
GD18-4_B1_scaffold_608877_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3740..5299
-----------------
DNA (1560bp)
protein (520aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPL3_SORCE
hypothetical protein
GD18-4_B1_scaffold_608877_6
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5471..6466
-----------------
DNA (996bp)
protein (332aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Sensor histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UMN8_MYXSD
sensor histidine kinase
GD18-4_B1_scaffold_608877_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6555..7022)
-----------------
DNA (468bp)
protein (156aa)
CMP/dCMP deaminase zinc-binding n=3 Tax=Anaeromyxobacter RepID=B4UEG9_ANASK
dCMP deaminase {ECO:0000313|EMBL:EYF00627.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
zinc-binding CMP/dCMP deaminase
GD18-4_B1_scaffold_608877_8
unknown

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comp(7035..7256)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

GD18-4_B1_scaffold_608877_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7318..8085)
-----------------
DNA (768bp)
protein (256aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Probable endonuclease 4 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6Y6_SORCE
hypothetical protein
GD18-4_B1_scaffold_608877_10
unknown

Not on your lists

8345..8749
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

GD18-4_B1_scaffold_608877_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8768..9217)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDT5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99397.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_608877_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9393..12134)
-----------------
DNA (2742bp)
protein (914aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0V0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39122.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_608877_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..13373)
-----------------
DNA (1089bp)
protein (363aa)
Putative transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2E0_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF00420.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
transcriptional regulator
GD18-4_B1_scaffold_608877_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14147..14770
-----------------
DNA (624bp)
protein (208aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3M9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94598.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_608877_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14767..16128
-----------------
DNA (1362bp)
protein (454aa)
Type III restriction protein res subunit n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUA2_HALO1
DNA helicase {ECO:0000313|EMBL:AKF07491.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
type III restriction protein res subunit
GD18-4_B1_scaffold_608877_16
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16115..17371
-----------------
DNA (1257bp)
protein (419aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUA1_HALO1
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_608877_17
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(17381..19579)
-----------------
DNA (2199bp)
protein (733aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PFP0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD23193.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
GD18-4_B1_scaffold_608877_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19638..19979)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y864_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF06152.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
Displaying 18 items

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