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GD18-4_B1_scaffold_673965

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_673965_1
unknown

Not on your lists

comp(89..436)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

GD18-4_B1_scaffold_673965_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(480..1304)
-----------------
DNA (825bp)
protein (275aa)
formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:ACL63658.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACL63658.1};; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9V5_ANAD2
GD18-4_B1_scaffold_673965_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1338..2981)
-----------------
DNA (1644bp)
protein (548aa)
Polymorphic outer membrane protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHW7_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF04305.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
polymorphic outer membrane protein
GD18-4_B1_scaffold_673965_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3301..4128)
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y841_SORCE
hypothetical protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EYF07244.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_673965_5
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4125..6101)
-----------------
DNA (1977bp)
protein (659aa)
ASPIC/UnbV domain-containing protein {ECO:0000313|EMBL:KIG11670.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Putative uncharacterized protein id=2200479 bin=GWB2_Elusimicrobia_63_16 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
GD18-4_B1_scaffold_673965_6
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6138..6359)
-----------------
DNA (222bp)
protein (74aa)
Tyrosine protein kinase:Serine/threonine protein kinase:PASTA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1J6_9DELT
Tyrosine protein kinase:Serine/threonine protein kinase:PASTA {ECO:0000313|EMBL:EDM80260.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
serine/threonine protein kinase
GD18-4_B1_scaffold_673965_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6399..8741)
-----------------
DNA (2343bp)
protein (781aa)
cafA; ribonuclease G (EC:3.1.4.-)
Ribonuclease G {ECO:0000313|EMBL:CAN97433.1}; EC=3.1.4.- {ECO:0000313|EMBL:CAN97433.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Ribonuclease G n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESZ7_SORC5
GD18-4_B1_scaffold_673965_8
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8782..9273)
-----------------
DNA (492bp)
protein (164aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQW4_9PLAN
D-tyrosyl-tRNA(Tyr) deacylase
GD18-4_B1_scaffold_673965_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9270..9689)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2T4_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08858.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_673965_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9698..10189)
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5R9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39806.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_673965_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10667..11752
-----------------
DNA (1086bp)
protein (362aa)
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase {ECO:0000313|EMBL:AGP32939.1}; EC=1.1.1.41 {ECO:0000313|EMBL:AGP32939.1};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Isocitrate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK65_SORCE
GD18-4_B1_scaffold_673965_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11749..13263
-----------------
DNA (1515bp)
protein (505aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7V6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40340.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_673965_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13260..13991
-----------------
DNA (732bp)
protein (244aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4Q4_SORCE
hypothetical protein
GD18-4_B1_scaffold_673965_14
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14025..15257)
-----------------
DNA (1233bp)
protein (411aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FLN4_STIAD
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
GD18-4_B1_scaffold_673965_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15556..17526)
-----------------
DNA (1971bp)
protein (657aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06681.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Metal dependent phosphohydrolase id=4426873 bin=GWC2_Methylomirabilis_70_16 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
metal dependent phosphohydrolase
GD18-4_B1_scaffold_673965_16
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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comp(17597..18346)
-----------------
DNA (750bp)
protein (250aa)
Uncharacterized protein n=1 Tax=Eimeria necatrix RepID=U6N2A9_9EIME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDJ69453.1}; TaxID=51315 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria necatrix.;"
GD18-4_B1_scaffold_673965_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18444..19661)
-----------------
DNA (1218bp)
protein (406aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX46_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF07659.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_673965_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19810..21561)
-----------------
DNA (1752bp)
protein (584aa)
Hypothetical membrane-associated protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI14_SORC5
Fe-S oxidoreductase {ECO:0000313|EMBL:AKF08280.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_673965_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21621..23120)
-----------------
DNA (1500bp)
protein (500aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSN0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34895.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_673965_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23378..23800
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y335_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39214.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_673965_21
unknown

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23797..24558
-----------------
DNA (762bp)
protein (254aa)

This feature has no annotations

GD18-4_B1_scaffold_673965_22
unknown

Not on your lists

24857..25444
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

GD18-4_B1_scaffold_673965_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25457..26842)
-----------------
DNA (1386bp)
protein (462aa)
Fis family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI41_SORCE
Fis family transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:AGP32211.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_673965_24
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

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27055..27720
-----------------
DNA (666bp)
protein (222aa)
FOG: CheY-like receiver id=3285926 bin=GWA2_Elusimicrobia_66_18 species=uncultured myxobacterium HF0200_05J13 genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
response regulator receiver domain-containing protein
Tax=GWC2_Elusimicrobia_65_9_curated
GD18-4_B1_scaffold_673965_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27744..28595
-----------------
DNA (852bp)
protein (284aa)
DNA methyltransferase n=1 Tax=Meiothermus timidus RepID=UPI000371FBC5
DNA modification methyltransferase {ECO:0000313|EMBL:AKF05598.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
DNA methylase N-4/N-6 domain-containing protein
GD18-4_B1_scaffold_673965_trna_2
unknown

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comp(28672..28759)
-----------------
DNA (88bp)
transferRNA Ser
GD18-4_B1_scaffold_673965_26
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28925..29494
-----------------
DNA (570bp)
protein (190aa)
Two component transcriptional regulator, Fis family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFR8_HALO1
Fis family transcriptional regulator
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ACY14520.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_673965_27
unknown

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comp(29495..30175)
-----------------
DNA (681bp)
protein (227aa)

This feature has no annotations

GD18-4_B1_scaffold_673965_28
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(30172..31029)
-----------------
DNA (858bp)
protein (286aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGM3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79658.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
GD18-4_B1_scaffold_673965_29
unknown

Not on your lists

comp(31029..31613)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

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