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GD18-4_B1_scaffold_652963

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_652963_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(319..1224)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GUR6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90657.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_652963_2

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comp(1271..3190)
-----------------
DNA (1920bp)
protein (640aa)
Probable potassium transport system protein kup n=1 Tax=uncultured bacterium A1Q1_fos_499 RepID=L7VZF7_9BACT
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1256578 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_499.;"
trkD; potassium transporter Kup
GD18-4_B1_scaffold_652963_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3270..3974)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXH3_HALO1
Uncharacterized protein {ECO:0000313|EMBL:AKF04688.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_652963_4
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4021..4707
-----------------
DNA (687bp)
protein (229aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
uracil-DNA glycosylase n=1 Tax=Streptomyces sulphureus RepID=UPI000379000D
uracil-DNA glycosylase
GD18-4_B1_scaffold_652963_5
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4743..6023
-----------------
DNA (1281bp)
protein (427aa)
Serine/threonine protein kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LW64_HALO1
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:KIG13639.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
serine/threonine protein kinase
GD18-4_B1_scaffold_652963_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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6046..7098
-----------------
DNA (1053bp)
protein (351aa)
Saccharopine dehydrogenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUQ8_PARL1
Saccharopine dehydrogenase {ECO:0000313|EMBL:GAK45672.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
saccharopine dehydrogenase
GD18-4_B1_scaffold_652963_7
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7108..8028)
-----------------
DNA (921bp)
protein (307aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=14627557 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
NAD-dependent epimerase/dehydratase
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
GD18-4_B1_scaffold_652963_8
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8171..9487
-----------------
DNA (1317bp)
protein (439aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8C2_9DELT
Endo-1,4-beta-xylanase A {ECO:0000313|EMBL:KIG16102.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
GD18-4_B1_scaffold_652963_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9515..10324)
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QME9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX62464.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
metal-dependent hydrolase-like protein
GD18-4_B1_scaffold_652963_10
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10385..11188)
-----------------
DNA (804bp)
protein (268aa)
Transcriptional regulator, MerR family n=2 Tax=Thermobifida fusca RepID=Q47MF6_THEFY
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AAZ56366.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
GD18-4_B1_scaffold_652963_11
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11340..12902
-----------------
DNA (1563bp)
protein (521aa)
hypothetical protein n=1 Tax=Paenibacillus peoriae RepID=UPI00026C5BB8
Uncharacterized protein {ECO:0000313|EMBL:EJZ62091.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
GD18-4_B1_scaffold_652963_12
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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12918..14186
-----------------
DNA (1269bp)
protein (423aa)
Uncharacterized protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0F9H6_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA44182.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
hypothetical protein
GD18-4_B1_scaffold_652963_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14220..16439)
-----------------
DNA (2220bp)
protein (740aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GA18_SORC5
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF07495.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_652963_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16436..17404)
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF07494.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_652963_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17401..18012)
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF87_PHEZH
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
GD18-4_B1_scaffold_652963_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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18077..19273
-----------------
DNA (1197bp)
protein (399aa)
dhlA; haloalkane dehalogenase (EC:3.8.1.5)
Hydrolase, alpha/beta fold family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S005_9GAMM
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:EEB78108.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
GD18-4_B1_scaffold_652963_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19339..19812)
-----------------
DNA (474bp)
protein (158aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Methylocystis parvus RepID=UPI000312D47A
3-demethylubiquinone-9 3-methyltransferase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_652963_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19930..21393)
-----------------
DNA (1464bp)
protein (488aa)
gltD; glutamate synthase (EC:1.4.1.13)
Glutamate synthase (NADPH) {ECO:0000313|EMBL:CAN95224.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CAN95224.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Glutamate synthase (NADPH) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLL6_SORC5
GD18-4_B1_scaffold_652963_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21386..22867)
-----------------
DNA (1482bp)
protein (494aa)
Glutamate synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHL6_SORCE
glutamate synthase
Glutamate synthase {ECO:0000313|EMBL:AGP32627.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 19 items

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