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GD18-4_B1_scaffold_873172

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_873172_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(468..1841)
-----------------
DNA (1374bp)
protein (458aa)
Fis family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQR2_SORCE
Fis family transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:AGP32933.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_873172_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1838..3340)
-----------------
DNA (1503bp)
protein (501aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Sensor histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLY2_SORC5
GD18-4_B1_scaffold_873172_3
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3506..4213
-----------------
DNA (708bp)
protein (236aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67MS8_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD41015.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
GD18-4_B1_scaffold_873172_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4204..5055)
-----------------
DNA (852bp)
protein (284aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94675.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94675.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8N6_SORC5
GD18-4_B1_scaffold_873172_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5131..9003
-----------------
DNA (3873bp)
protein (1291aa)
ATPase/protein kinase family protein n=2 Tax=Singulisphaera acidiphila RepID=L0D8J3_SINAD
ATPase/protein kinase family protein
ATPase/protein kinase family protein {ECO:0000313|EMBL:AGA25552.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
GD18-4_B1_scaffold_873172_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9042..9581
-----------------
DNA (540bp)
protein (180aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CAN91235.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CAN91235.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F048_SORC5
GD18-4_B1_scaffold_873172_7

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comp(9690..10331)
-----------------
DNA (642bp)
protein (214aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1256585 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_565.;"
FMN-dependent NADH-azoreductase n=1 Tax=uncultured bacterium A1Q1_fos_565 RepID=L7W206_9BACT
NAD(P)H dehydrogenase (quinone)
GD18-4_B1_scaffold_873172_8

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comp(10355..10954)
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_565 RepID=L7VY93_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72654.1}; TaxID=1256585 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_565.;"
GD18-4_B1_scaffold_873172_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11076..12989)
-----------------
DNA (1914bp)
protein (638aa)
ABC transporter family carbohydrate exporter n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHY4_SORC5
msbA1; carbohydrate ABC transporter
ABC transporter family carbohydrate exporter {ECO:0000313|EMBL:CAN90174.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_873172_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12986..14827)
-----------------
DNA (1842bp)
protein (614aa)
ABC transporter family carbohydrate exporter n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHY7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF05559.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
msbA2; carbohydrate ABC transporter
GD18-4_B1_scaffold_873172_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14880..15752)
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHZ0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90176.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_873172_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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15843..17030
-----------------
DNA (1188bp)
protein (396aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SRM4_PSYIN
Uncharacterized protein {ECO:0000313|EMBL:GAO36933.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PAS/PAC sensor-containing diguanylate cyclase
GD18-4_B1_scaffold_873172_13
unknown

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17143..17424
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

GD18-4_B1_scaffold_873172_14
unknown

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17421..17840
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037D2F44
GD18-4_B1_scaffold_873172_15
unknown

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comp(18261..18602)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

GD18-4_B1_scaffold_873172_16
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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18631..20535
-----------------
DNA (1905bp)
protein (635aa)
Radical SAM domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEJ3_ANADF
radical SAM domain-containing protein
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
GD18-4_B1_scaffold_873172_17
unknown

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20579..21013
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

GD18-4_B1_scaffold_873172_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21108..21461
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFI6_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27482.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_873172_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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21678..22229
-----------------
DNA (552bp)
protein (184aa)
Beta-Ig-H3/fasciclin n=1 Tax=Leptonema illini DSM 21528 RepID=H2CCI3_9LEPT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
GD18-4_B1_scaffold_873172_20
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22657..23097)
-----------------
DNA (441bp)
protein (147aa)
IS3 family transposase OrfA n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UK28_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF86380.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
IS3 family transposase OrfA
GD18-4_B1_scaffold_873172_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(23405..24655)
-----------------
DNA (1251bp)
protein (417aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK89_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69711.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 21 items

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