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GD18-4_B1_scaffold_1039819

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1039819_1
unknown

Not on your lists

comp(47..868)
-----------------
DNA (822bp)
protein (274aa)

This feature has no annotations

GD18-4_B1_scaffold_1039819_2
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(949..1506)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=1 Tax=Campylobacter concisus UNSW2 RepID=U2GXL1_9PROT
Sel1 domain protein repeat-containing protein
Tax=CG_Delta_07
GD18-4_B1_scaffold_1039819_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

1538..2536
-----------------
DNA (999bp)
protein (333aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RSV9_PROA4
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
GD18-4_B1_scaffold_1039819_4
unknown

Not on your lists

comp(2587..2946)
-----------------
DNA (360bp)
protein (120aa)

This feature has no annotations

GD18-4_B1_scaffold_1039819_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3033..3620)
-----------------
DNA (588bp)
protein (196aa)
Cold-shock protein DNA-binding protein id=2032279 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cold-shock DNA-binding protein family protein
Tax=RBG_16_Gamma2_60_9_curated
GD18-4_B1_scaffold_1039819_6
unknown

Not on your lists

comp(3683..4090)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

GD18-4_B1_scaffold_1039819_7
Bacillus xiamenensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4090..4368)
-----------------
DNA (279bp)
protein (93aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002FA8AE4
PTS galactitol transporter subunit IIB
PTS family galactitol (Gat) porter component IIB {ECO:0000313|EMBL:EKF35237.1}; TaxID=1178537 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus xiamenensis.;"
GD18-4_B1_scaffold_1039819_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4365..6149)
-----------------
DNA (1785bp)
protein (595aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EZP57232.1}; EC=2.7.3.9 {ECO:0000313|EMBL:EZP57232.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DF8626
phosphoenolpyruvate-protein phosphotransferase
GD18-4_B1_scaffold_1039819_9
Bacillus pumilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6146..7624)
-----------------
DNA (1479bp)
protein (493aa)
PTS system, galactitol-specific IIC component {ECO:0000313|EMBL:KIL25822.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KIL25822.1};; TaxID=1408 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pumilus (Bacillus mesentericus).;"
PTS galactitol transporter subunit IIC n=1 Tax=Brevibacillus sp. phR RepID=UPI0002FED518
PTS system galactitol (gat) transporter subunit IIC
GD18-4_B1_scaffold_1039819_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7621..8112)
-----------------
DNA (492bp)
protein (164aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MRV1_9THEO
PTS sugar transporter subunit IIA {ECO:0000313|EMBL:EZQ16194.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative PTS IIA-like nitrogen-regulatory protein PtsN
GD18-4_B1_scaffold_1039819_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8161..9438
-----------------
DNA (1278bp)
protein (426aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQG6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF07301.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1039819_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..12512)
-----------------
DNA (2304bp)
protein (768aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F254_SORC5
Transcription accessory protein (S1 RNA-binding domain) {ECO:0000313|EMBL:EYF03673.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1039819_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(12718..13191)
-----------------
DNA (474bp)
protein (158aa)
GCN5-related N-acetyltransferase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L0P7_9EURY
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GD18-4_B1_scaffold_1039819_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13366..17403
-----------------
DNA (4038bp)
protein (1346aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9A6_SORCE
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF06826.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1039819_15
unknown

Not on your lists

comp(17393..18496)
-----------------
DNA (1104bp)
protein (368aa)

This feature has no annotations

GD18-4_B1_scaffold_1039819_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18493..20181)
-----------------
DNA (1689bp)
protein (563aa)
Outer membrane porin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GL52_SORC5
outer membrane porin
Outer membrane porin {ECO:0000313|EMBL:CAN90226.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1039819_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..24103)
-----------------
DNA (3690bp)
protein (1230aa)
Methionine synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8P4_SORCE
Methionine synthase {ECO:0000313|EMBL:AGP39228.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
methionine synthase
GD18-4_B1_scaffold_1039819_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24123..25082)
-----------------
DNA (960bp)
protein (320aa)
Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWT8_9DELT
SAM-dependent methyltransferase {ECO:0000313|EMBL:AKF07698.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
ArsR family transcriptional regulator
GD18-4_B1_scaffold_1039819_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25135..25824)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein id=12556316 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GD18-4_B1_scaffold_1039819_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25821..26177)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNQ4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93617.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1039819_21
unknown

Not on your lists

26256..26390
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

GD18-4_B1_scaffold_1039819_22
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26404..26844)
-----------------
DNA (441bp)
protein (147aa)
Type IV pilus secretin PilQ n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H857_ANADF
type IV pilus secretin PilQ
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_1039819_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26888..28312)
-----------------
DNA (1425bp)
protein (475aa)
Fis family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLI5_SORCE
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EYF00490.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Fis family transcriptional regulator
GD18-4_B1_scaffold_1039819_24
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28309..29760)
-----------------
DNA (1452bp)
protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
Sensor protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CRY0_MYXFH
sensor protein
GD18-4_B1_scaffold_1039819_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29939..31639
-----------------
DNA (1701bp)
protein (567aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y261_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF00492.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1039819_26
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31660..32316
-----------------
DNA (657bp)
protein (219aa)
Carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Carbonic anhydrase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQV2_GRABC
GD18-4_B1_scaffold_1039819_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32273..33136)
-----------------
DNA (864bp)
protein (288aa)
Ribosomal protein L11 methyltransferase n=2 Tax=Ralstonia RepID=E2T4N5_9RALS
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AKF04672.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
prmA; 50S ribosomal protein L11 methyltransferase
GD18-4_B1_scaffold_1039819_28
unknown

Not on your lists

comp(33168..33341)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

GD18-4_B1_scaffold_1039819_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33488..34864
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U5U9_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43235.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
GD18-4_B1_scaffold_1039819_30
unknown

Not on your lists

35117..35356
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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