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GD18-4_B1_scaffold_952846

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_952846_1
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(67..645)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0F6_9PROT
hypothetical protein
Tax=CG_Desulfovib_01
GD18-4_B1_scaffold_952846_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(642..1451)
-----------------
DNA (810bp)
protein (270aa)
Probable secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FF24_SORC5
hypothetical protein
Probable secreted protein {ECO:0000313|EMBL:CAN94948.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_952846_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1532..2491
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2H4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37083.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_952846_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2769..3248
-----------------
DNA (480bp)
protein (160aa)
Bacterio-opsin linked product n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAV3_ANADF
bacterio-opsin linked protein
Bacterio-opsin linked product {ECO:0000313|EMBL:ABS25849.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_952846_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3642..4730
-----------------
DNA (1089bp)
protein (363aa)
Putative sensory box histidine kinase/response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAG8_MYXFH
putative sensory box histidine kinase/response regulator
Putative sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AEI65826.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
GD18-4_B1_scaffold_952846_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4796..6043)
-----------------
DNA (1248bp)
protein (416aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7E0_SORCE
HtrA protease/chaperone protein {ECO:0000313|EMBL:EYF06723.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_952846_7
unknown

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comp(5982..6230)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

GD18-4_B1_scaffold_952846_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6410..7723
-----------------
DNA (1314bp)
protein (438aa)
Collagen n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSF0_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01618.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
collagen
GD18-4_B1_scaffold_952846_9
unknown

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comp(7927..9012)
-----------------
DNA (1086bp)
protein (362aa)

This feature has no annotations

GD18-4_B1_scaffold_952846_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9099..9971)
-----------------
DNA (873bp)
protein (291aa)
HEAT repeat-containing PBS lyase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UMG1_MYXSD
HEAT repeat protein {ECO:0000313|EMBL:AKF09198.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
HEAT repeat-containing PBS lyase
GD18-4_B1_scaffold_952846_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10292..13012
-----------------
DNA (2721bp)
protein (907aa)
Probable surface antigen n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3T7_SORC5
Outer membrane protein assembly factor BamA {ECO:0000256|SAAS:SAAS00011174}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
surface antigen
GD18-4_B1_scaffold_952846_12
unknown

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13163..13303
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

GD18-4_B1_scaffold_952846_13
unknown

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13477..14409
-----------------
DNA (933bp)
protein (311aa)

This feature has no annotations

GD18-4_B1_scaffold_952846_14
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

14591..16123
-----------------
DNA (1533bp)
protein (511aa)
DNA Polymerase, Y-family n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QD09_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KDA53715.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
DNA Polymerase, Y-family
GD18-4_B1_scaffold_952846_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16260..16904)
-----------------
DNA (645bp)
protein (215aa)
thiE2; thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate diphosphorylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXD7_SORC5
Thiamin-phosphate pyrophosphorylase {ECO:0000313|EMBL:AKF05805.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_952846_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16901..17203)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXE1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF05806.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_952846_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17393..18328
-----------------
DNA (936bp)
protein (312aa)
RNA-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G206_SORC5
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:CAN92565.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_952846_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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18390..18551
-----------------
DNA (162bp)
protein (54aa)
50S ribosomal protein L33 2 n=2 Tax=Sorangium cellulosum RepID=RL332_SORC5
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_952846_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18960..20120)
-----------------
DNA (1161bp)
protein (387aa)
Putative racemase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5Y7_SORC5
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:EYF05233.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
racemase
GD18-4_B1_scaffold_952846_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20208..20555)
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5Y9_SORC5
Putative sterol carrier protein {ECO:0000313|EMBL:EYF05234.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_952846_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20722..22011
-----------------
DNA (1290bp)
protein (430aa)
Histidinol dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYI6_SORCE
Histidinol dehydrogenase {ECO:0000313|EMBL:AKF04902.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_952846_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22259..23467)
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6U3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40554.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 22 items

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