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GD18-4_B1_scaffold_1295402

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1295402_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(245..1084)
-----------------
DNA (840bp)
protein (280aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4S3_SORCE
GD18-4_B1_scaffold_1295402_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1147..2529
-----------------
DNA (1383bp)
protein (461aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QRQ4_9DELT
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II {ECO:0000313|EMBL:EPX59298.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
GD18-4_B1_scaffold_1295402_3
unknown

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comp(2548..3543)
-----------------
DNA (996bp)
protein (332aa)

This feature has no annotations

GD18-4_B1_scaffold_1295402_4
unknown

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comp(3540..4766)
-----------------
DNA (1227bp)
protein (409aa)

This feature has no annotations

GD18-4_B1_scaffold_1295402_5
unknown

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comp(4763..5833)
-----------------
DNA (1071bp)
protein (357aa)

This feature has no annotations

GD18-4_B1_scaffold_1295402_6
unknown

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comp(5830..6480)
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

GD18-4_B1_scaffold_1295402_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6628..7998)
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036C4690
Uncharacterized protein {ECO:0000313|EMBL:EMA42719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
hypothetical protein
GD18-4_B1_scaffold_1295402_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8372..9952)
-----------------
DNA (1581bp)
protein (527aa)
Na+/H+ antiporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9JZN7_9DELT id=5224894 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Sodium:proton antiporter {ECO:0000313|EMBL:KFA89669.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Na+/H+ antiporter
GD18-4_B1_scaffold_1295402_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10053..11021
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9M2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41026.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1295402_10
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11053..11973)
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036F38A4
2-ketoisovalerate ferredoxin oxidoreductase subunit beta
Tax=CG_Delta_07
GD18-4_B1_scaffold_1295402_11
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11973..13133)
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003678E8E
2-oxoacid:ferredoxin oxidoreductase subunit alpha
Tax=CG_Delta_07
GD18-4_B1_scaffold_1295402_12
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13130..15361)
-----------------
DNA (2232bp)
protein (744aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000365AE08
putative glutamate synthase (NADPH) small subunit
Tax=CG_Delta_07
GD18-4_B1_scaffold_1295402_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15424..16248)
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5CD2E
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:AKF09057.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
2-oxo acid dehydrogenase acyltransferase catalytic subunit
Displaying 13 items

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