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GD18-4_B1_scaffold_1446247

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1446247_1
unknown

Not on your lists

comp(2..73)
-----------------
DNA (72bp)
protein (24aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_2
unknown

Not on your lists

comp(153..521)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(518..10606)
-----------------
DNA (10089bp)
protein (3363aa)
YD repeat protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6T0_DESAT
Uncharacterized protein {ECO:0000313|EMBL:KFE66857.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
wapA_[H]; YD repeat protein
GD18-4_B1_scaffold_1446247_4
unknown

Not on your lists

11660..11995
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_5
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12116..12862)
-----------------
DNA (747bp)
protein (249aa)
Putative phage repressor n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUM6_ACIC1
putative phage repressor
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
GD18-4_B1_scaffold_1446247_6
unknown

Not on your lists

comp(13027..14064)
-----------------
DNA (1038bp)
protein (346aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14054..14986)
-----------------
DNA (933bp)
protein (311aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7B1_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN92803.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1446247_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..16356)
-----------------
DNA (1329bp)
protein (443aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9N0_SORC5
Serine-threonine protein kinase {ECO:0000313|EMBL:EYF01794.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1446247_9
unknown

Not on your lists

16683..17051
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17106..18305
-----------------
DNA (1200bp)
protein (400aa)
transposase IS3/IS911 family protein; K07497 putative transposase id=24503715 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integrase catalytic subunit
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_1446247_11
unknown

Not on your lists

18377..20203
-----------------
DNA (1827bp)
protein (609aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_12
unknown

Not on your lists

20249..21073
-----------------
DNA (825bp)
protein (275aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_13
unknown

Not on your lists

21088..21612
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_14
unknown

Not on your lists

22180..22983
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_15
unknown

Not on your lists

23287..23466
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_16
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23471..25156
-----------------
DNA (1686bp)
protein (562aa)
resolvase n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237DF23
DNA resolvase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
GD18-4_B1_scaffold_1446247_trna_1
unknown

Not on your lists

comp(25138..25209)
-----------------
DNA (72bp)
transferRNA Met
GD18-4_B1_scaffold_1446247_17

Not on your lists

25385..25654
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZBD6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD41788.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glutaredoxin 3
GD18-4_B1_scaffold_1446247_18
unknown

Not on your lists

25651..26199
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26206..27120)
-----------------
DNA (915bp)
protein (305aa)
Cytochrome c class I n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGV8_RHOMR
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEN74322.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
GD18-4_B1_scaffold_1446247_20
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27223..27522
-----------------
DNA (300bp)
protein (100aa)
High-potential iron-sulfur protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CD14_9LEPT
High-potential iron-sulfur protein {ECO:0000256|RuleBase:RU000620}; Short=HiPIP {ECO:0000256|RuleBase:RU000620};; Flags: Precursor;; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
hypothetical protein
GD18-4_B1_scaffold_1446247_21
unknown

Not on your lists

comp(27568..28197)
-----------------
DNA (630bp)
protein (210aa)

This feature has no annotations

GD18-4_B1_scaffold_1446247_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28412..29218
-----------------
DNA (807bp)
protein (269aa)
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETK0_SORC5
RNA polymerase sigma factor RpoH {ECO:0000313|EMBL:AKF08610.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
RNA polymerase sigma factor
GD18-4_B1_scaffold_1446247_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29350..30957)
-----------------
DNA (1608bp)
protein (536aa)
Outer membrane efflux protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GFG4_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF00705.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
outer membrane efflux protein
GD18-4_B1_scaffold_1446247_24
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31488..33656)
-----------------
DNA (2169bp)
protein (723aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AYX3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD94453.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
pknB5; serine/threonine protein kinase
GD18-4_B1_scaffold_1446247_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33661..35337)
-----------------
DNA (1677bp)
protein (559aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
CTP synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQC8_SORCE
GD18-4_B1_scaffold_1446247_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35675..35941
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7B7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40306.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1446247_27
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35949..36872
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GXZ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA90179.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
GD18-4_B1_scaffold_1446247_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36896..38338)
-----------------
DNA (1443bp)
protein (481aa)
FAD-linked oxidase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPT8_SORCE
FAD-linked oxidase
FAD-linked oxidase {ECO:0000313|EMBL:AGP32633.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1446247_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39162..41090
-----------------
DNA (1929bp)
protein (643aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN93650.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN93650.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRN8_SORC5
Displaying items 1-30 of 36 in total

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