ggKbase home page

GD18-4_B1_scaffold_1448927

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1448927_1
unknown

Not on your lists

comp(1..1800)
-----------------
DNA (1800bp)
protein (600aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1885..2904
-----------------
DNA (1020bp)
protein (340aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94778.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94778.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9N0_SORC5
GD18-4_B1_scaffold_1448927_3
unknown

Not on your lists

3029..3157
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_4
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3178..5898)
-----------------
DNA (2721bp)
protein (907aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003727318
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
GD18-4_B1_scaffold_1448927_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5965..8667
-----------------
DNA (2703bp)
protein (901aa)
Phosphoesterase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD08_SINAD
Phosphoesterase family protein
Phosphoesterase family protein {ECO:0000313|EMBL:AGA26750.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
GD18-4_B1_scaffold_1448927_6
unknown

Not on your lists

comp(8678..9277)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_7
unknown

Not on your lists

9409..9783
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_8
unknown

Not on your lists

comp(9657..9929)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_9
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9958..10671
-----------------
DNA (714bp)
protein (238aa)
PREDICTED: loricrin n=1 Tax=Heterocephalus glaber RepID=UPI00034FA0C4
Uncharacterized protein {ECO:0000313|EMBL:KIG17150.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
PE-PGRS family protein
GD18-4_B1_scaffold_1448927_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10677..11558)
-----------------
DNA (882bp)
protein (294aa)
Putative DNA-binding regulatory protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U1L6_9DELT
Transcriptional regulator {ECO:0000313|EMBL:KFA91775.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative DNA-binding regulatory protein
GD18-4_B1_scaffold_1448927_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11606..13222
-----------------
DNA (1617bp)
protein (539aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94675.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94675.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8N6_SORC5
GD18-4_B1_scaffold_1448927_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13219..14190
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FR14_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95244.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1448927_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14190..15488
-----------------
DNA (1299bp)
protein (433aa)
Kelch repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJB4_9BACT
Kelch repeat-containing protein {ECO:0000313|EMBL:EEF60152.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
GD18-4_B1_scaffold_1448927_14
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15507..16721)
-----------------
DNA (1215bp)
protein (405aa)
Putative glycosyl transferase n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KI96_STRAM
Oleandomycin glycosyltransferase {ECO:0000313|EMBL:KKD04204.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
glycosyl transferase family protein
GD18-4_B1_scaffold_1448927_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16732..17544)
-----------------
DNA (813bp)
protein (271aa)
Alpha/beta superfamily hydrolase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FSU6_STIAD
alpha/beta superfamily hydrolase
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:ADO74570.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
GD18-4_B1_scaffold_1448927_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17730..18119
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF09929.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_1448927_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18116..19645
-----------------
DNA (1530bp)
protein (510aa)
Choline dehydrogenase {ECO:0000313|EMBL:AKF09928.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Putative choline dehydrogenase id=4715556 bin=GWA2__Bacteriovorax-rel_49_15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
GD18-4_B1_scaffold_1448927_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19926..21644
-----------------
DNA (1719bp)
protein (573aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJF7_SORC5
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF03637.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_1448927_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21646..28062)
-----------------
DNA (6417bp)
protein (2139aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTB2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF00747.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1448927_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28215..29885
-----------------
DNA (1671bp)
protein (557aa)
GlpD protein {ECO:0000313|EMBL:CAN91332.1}; EC=1.1.99.5 {ECO:0000313|EMBL:CAN91332.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GlpD protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F150_SORC5
glpD; hypothetical protein
GD18-4_B1_scaffold_1448927_21
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29919..30272
-----------------
DNA (354bp)
protein (118aa)
Tax=CG_Delta_07
GD18-4_B1_scaffold_1448927_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30298..31710)
-----------------
DNA (1413bp)
protein (471aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FSG4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95394.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1448927_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32035..33567
-----------------
DNA (1533bp)
protein (511aa)
Beta-xylosidase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PK73_9DELT
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:AKF03205.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
glucosyl hydrolase family protein
GD18-4_B1_scaffold_1448927_24
unknown

Not on your lists

33610..34884
-----------------
DNA (1275bp)
protein (425aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_25
Eimeria praecox, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(34903..35634)
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6H6E8_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDI86299.1}; TaxID=51316 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria praecox.;"
polyketide synthase
GD18-4_B1_scaffold_1448927_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35688..36854)
-----------------
DNA (1167bp)
protein (389aa)
Putative aminotransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6X4_SORC5
Putative aminotransferase {ECO:0000313|EMBL:EYF05208.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
aminotransferase
GD18-4_B1_scaffold_1448927_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36955..39096
-----------------
DNA (2142bp)
protein (714aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP99_KORVE
Uncharacterized protein {ECO:0000313|EMBL:EYF00646.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1448927_28
unknown

Not on your lists

comp(39097..39198)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

GD18-4_B1_scaffold_1448927_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39341..40204)
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF03658.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1448927_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40207..42492)
-----------------
DNA (2286bp)
protein (762aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTQ7_SORCE
TonB family protein / TonB-dependent receptor {ECO:0000313|EMBL:EYF03659.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy