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GD18-4_B1_scaffold_1450402

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1450402_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..885
-----------------
DNA (885bp)
protein (295aa)
FHA domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQJ6_SORC5
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:CAN90453.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1450402_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

971..1384
-----------------
DNA (414bp)
protein (138aa)
NUDIX hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHQ5_SORCE
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AGP32061.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1450402_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1381..1893
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05796.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_1450402_4
unknown

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1897..2298
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

GD18-4_B1_scaffold_1450402_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2295..3746
-----------------
DNA (1452bp)
protein (484aa)
PEGA domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7D3_ANAD2
Uncharacterized protein {ECO:0000313|EMBL:AKF04332.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PEGA domain-containing protein
GD18-4_B1_scaffold_1450402_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3776..4519
-----------------
DNA (744bp)
protein (248aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKQ0_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08841.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1450402_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4875..6602
-----------------
DNA (1728bp)
protein (576aa)
ndhA; NADH dehydrogenase subunit 1 (EC:1.6.5.-)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
NADH-quinone oxidoreductase subunit H n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F4Q4_SORC5
GD18-4_B1_scaffold_1450402_8
unknown

Not on your lists

6663..8909
-----------------
DNA (2247bp)
protein (749aa)

This feature has no annotations

GD18-4_B1_scaffold_1450402_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8909..10936
-----------------
DNA (2028bp)
protein (676aa)
nuoM2; NADH dehydrogenase I subunit M (EC:1.6.5.3)
NADH dehydrogenase I chain M {ECO:0000313|EMBL:CAN97779.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CAN97779.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F578_SORC5
GD18-4_B1_scaffold_1450402_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10966..11682)
-----------------
DNA (717bp)
protein (239aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uridylate kinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQD4_SORCE
GD18-4_B1_scaffold_1450402_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11829..13223
-----------------
DNA (1395bp)
protein (465aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8V6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41314.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1450402_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13320..13817
-----------------
DNA (498bp)
protein (166aa)
Transcription elongation factor GreA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSC2_SORC5
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
transcription elongation factor GreA
GD18-4_B1_scaffold_1450402_13
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13777..15909
-----------------
DNA (2133bp)
protein (711aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HGZ9_ACHXA
Putative ATP-dependent DNA helicase recG {ECO:0000313|EMBL:KCZ87820.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannaschiana VP2.;"
GD18-4_B1_scaffold_1450402_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15906..18962
-----------------
DNA (3057bp)
protein (1019aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSB8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93754.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1450402_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18949..19650
-----------------
DNA (702bp)
protein (234aa)
Uracil-DNA glycosylase, family 5 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q4Y3_9DELT
Uracil-DNA glycosylase {ECO:0000313|EMBL:KFA88785.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
uracil-DNA glycosylase family protein
GD18-4_B1_scaffold_1450402_trna_1
unknown

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19699..19771
-----------------
DNA (73bp)
transferRNA Lys
GD18-4_B1_scaffold_1450402_16
unknown

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comp(19780..20475)
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8C1_SORCE
hypothetical protein
GD18-4_B1_scaffold_1450402_17
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20615..21313)
-----------------
DNA (699bp)
protein (233aa)
Urease accessory protein UreG n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CM81_MYXFH
Urease accessory protein UreG {ECO:0000313|EMBL:AKF79580.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
urease accessory protein ureg
GD18-4_B1_scaffold_1450402_18
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21333..22007)
-----------------
DNA (675bp)
protein (225aa)
Urease accessory protein UreF n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRU2_CORCM
ureF; urease accessory protein uref
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
GD18-4_B1_scaffold_1450402_19
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22010..23725)
-----------------
DNA (1716bp)
protein (572aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
ureC; urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=URE1_SORC5
GD18-4_B1_scaffold_1450402_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23722..24393)
-----------------
DNA (672bp)
protein (224aa)
ureA; bifunctional urease subunit gamma/beta (EC:3.5.1.5)
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089, ECO:0000313|EMBL:CAN96717.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Urease, beta/gamma subunit n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GP81_SORC5
GD18-4_B1_scaffold_1450402_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24466..25287)
-----------------
DNA (822bp)
protein (274aa)
Urease accessory protein UreD n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRU6_CORCM
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ureD; urease accessory protein, ured
GD18-4_B1_scaffold_1450402_22
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25516..26097
-----------------
DNA (582bp)
protein (194aa)
Transcriptional regulator, MerR family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DE80_MYXXD
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABF88971.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
GD18-4_B1_scaffold_1450402_23
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26094..28658
-----------------
DNA (2565bp)
protein (855aa)
von Willebrand factor type A domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNI9_MYXFH
von Willebrand factor A {ECO:0000313|EMBL:AKF79529.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
von Willebrand factor type A domain-containing protein
GD18-4_B1_scaffold_1450402_24
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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28679..29356
-----------------
DNA (678bp)
protein (226aa)
id=3375326 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
GD18-4_B1_scaffold_1450402_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29422..31212
-----------------
DNA (1791bp)
protein (597aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGY6_ANADF
phosphoenolpyruvate carboxykinase
GD18-4_B1_scaffold_1450402_26
unknown

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31495..32490
-----------------
DNA (996bp)
protein (332aa)

This feature has no annotations

GD18-4_B1_scaffold_1450402_27
unknown

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comp(32494..32937)
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

GD18-4_B1_scaffold_1450402_28
unknown

Not on your lists

comp(32955..33065)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

Displaying 29 items

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