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GD18-4_B1_scaffold_1633581

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1633581_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..306)
-----------------
DNA (306bp)
protein (102aa)
RNA-binding region RNP-1 (RNA recognition motif) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYW0_SORC5
RNA recognition motif-containing protein
RNA-binding region RNP-1 (RNA recognition motif) {ECO:0000313|EMBL:CAN97579.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1633581_2
unknown

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585..1070
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

GD18-4_B1_scaffold_1633581_3
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1100..1600)
-----------------
DNA (501bp)
protein (167aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMK7_GEOS8
FKBP-type peptidylprolyl isomerase
GD18-4_B1_scaffold_1633581_4
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1628..2440)
-----------------
DNA (813bp)
protein (271aa)
Methyltransferase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WWR6_9ACTO
Methyltransferase {ECO:0000313|EMBL:EFL28692.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
putative methyltransferase
GD18-4_B1_scaffold_1633581_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2626..3465
-----------------
DNA (840bp)
protein (280aa)
Cell wall surface anchor family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWK6_SORC5
cell wall surface anchor family protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:CAN93943.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1633581_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3582..4448
-----------------
DNA (867bp)
protein (289aa)
Cell wall surface anchor family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWK6_SORC5
cell wall surface anchor family protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:CAN93943.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1633581_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4482..6203)
-----------------
DNA (1722bp)
protein (574aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN95665.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN95665.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2M3_SORC5
GD18-4_B1_scaffold_1633581_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6251..6898)
-----------------
DNA (648bp)
protein (216aa)
Intracellular protease, PfpI family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSJ3_PSEUU
intracellular protease PfpI family
Intracellular protease, PfpI family {ECO:0000313|EMBL:ADV27207.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
GD18-4_B1_scaffold_1633581_9
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6991..7506
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ENL3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF86276.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
GD18-4_B1_scaffold_1633581_10
unknown

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7503..7784
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

GD18-4_B1_scaffold_1633581_11
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7884..9254)
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000379D452
Acyltransferase {ECO:0000313|EMBL:EDM84445.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
acyltransferase
GD18-4_B1_scaffold_1633581_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9317..10006
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKA9_9CYAN
short-chain dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFZ20855.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
GD18-4_B1_scaffold_1633581_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10083..10538
-----------------
DNA (456bp)
protein (152aa)
Alkyl hydroperoxide reductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHH3_SORCE
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AGP32582.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1633581_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10701..13061
-----------------
DNA (2361bp)
protein (787aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD24_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42325.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1633581_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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13298..13978
-----------------
DNA (681bp)
protein (227aa)
UbiE/COQ5 methyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ55_9GAMM
UbiE/COQ5 methyltransferase
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:CBL44847.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
GD18-4_B1_scaffold_1633581_16
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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14044..15270
-----------------
DNA (1227bp)
protein (409aa)
Uncharacterized protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HQS1_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA55199.1}; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
GD18-4_B1_scaffold_1633581_17
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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15428..17077
-----------------
DNA (1650bp)
protein (550aa)
RHS repeat-associated core domain n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2K1M2_MARM1
RHS repeat-associated core domain
RHS repeat-associated core domain {ECO:0000313|EMBL:ADZ92252.1}; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028; / MMB-1).;"
Displaying 17 items

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