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GD18-4_B1_scaffold_1769599

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1769599_1
unknown

Not on your lists

comp(1..543)
-----------------
DNA (543bp)
protein (181aa)

This feature has no annotations

GD18-4_B1_scaffold_1769599_2
unknown

Not on your lists

comp(621..1349)
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

GD18-4_B1_scaffold_1769599_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1417..5109)
-----------------
DNA (3693bp)
protein (1231aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNM5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP34169.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
ATPase/protein kinase family protein
GD18-4_B1_scaffold_1769599_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5106..5711)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW33_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34803.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1769599_5
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5802..6830
-----------------
DNA (1029bp)
protein (343aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SCP0_HAHCH
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ABC31584.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
GD18-4_B1_scaffold_1769599_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6898..7710
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYI1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35678.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1769599_7
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8151..9596)
-----------------
DNA (1446bp)
protein (482aa)
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase {ECO:0000255|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000255|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000255|HAMAP-Rule:MF_00484}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
Glycogen synthase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=GLGA_ANASK
GD18-4_B1_scaffold_1769599_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9598..10539
-----------------
DNA (942bp)
protein (314aa)
hemK; methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Release factor glutamine methyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHK7_SORC5
GD18-4_B1_scaffold_1769599_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10679..11296
-----------------
DNA (618bp)
protein (206aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPX7_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF11749.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_1769599_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11300..11458
-----------------
DNA (159bp)
protein (53aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FUV3_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01683.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_1769599_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11481..12167
-----------------
DNA (687bp)
protein (229aa)
Chemotaxis protein CheY n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNK7_SORCE
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AGP32248.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1769599_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12164..13495
-----------------
DNA (1332bp)
protein (444aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Sensor histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FUV8_SORC5
GD18-4_B1_scaffold_1769599_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14490..15872
-----------------
DNA (1383bp)
protein (461aa)
Protein kinase domain with FHA domain n=2 Tax=Singulisphaera acidiphila RepID=L0D830_SINAD
protein kinase domain with FHA domain
Protein kinase domain with FHA domain {ECO:0000313|EMBL:AGA24978.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
GD18-4_B1_scaffold_1769599_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15915..16883)
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZ29_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37591.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1769599_15

Not on your lists

comp(16870..17508)
-----------------
DNA (639bp)
protein (213aa)
Marine sediment metagenome DNA, contig: S01H1_L04311 {ECO:0000313|EMBL:GAF83614.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GD18-4_B1_scaffold_1769599_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17560..18423)
-----------------
DNA (864bp)
protein (288aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] id=1245786 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
shikimate 5-dehydrogenase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
GD18-4_B1_scaffold_1769599_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19862)
-----------------
DNA (1443bp)
protein (481aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR72_SORCE
hypothetical protein
GD18-4_B1_scaffold_1769599_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19883..20206)
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF03662.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Cytochrome b5 (Modular protein) id=4491660 bin=GWA2_Elusi_like_61_42 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
heavy metal translocating P-type ATPase
GD18-4_B1_scaffold_1769599_19
unknown

Not on your lists

comp(20381..20965)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

GD18-4_B1_scaffold_1769599_20
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21030..22568)
-----------------
DNA (1539bp)
protein (513aa)
hypothetical protein n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002556EB4
Uncharacterized protein {ECO:0000313|EMBL:KFA94786.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
subtilisin-like serine protease
GD18-4_B1_scaffold_1769599_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22821..23546)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA94786.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
GD18-4_B1_scaffold_1769599_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23551..24534)
-----------------
DNA (984bp)
protein (328aa)
ATPase central domain-containing protein n=1 Tax=Aeromonas hydrophila ML09-119 RepID=R4V9X2_AERHY
ATPase central domain-containing protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
GD18-4_B1_scaffold_1769599_23
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24531..24731)
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA94785.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Putative uncharacterized protein id=1842268 bin=GWE2_Gammaproteobacteria_37_16 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
type I restriction/modification system DNA methyltransferase
GD18-4_B1_scaffold_1769599_24
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25125..26747)
-----------------
DNA (1623bp)
protein (541aa)
Mechanosensitive ion channel family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMI5_CORCM
yggB; mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:AFE10959.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
GD18-4_B1_scaffold_1769599_25
unknown

Not on your lists

comp(26752..27426)
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

GD18-4_B1_scaffold_1769599_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27455..28432)
-----------------
DNA (978bp)
protein (326aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC81_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF09646.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_1769599_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28542..30092
-----------------
DNA (1551bp)
protein (517aa)
HAD family hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHD9_SORCE
HAD superfamily (Subfamily IG) hydrolase, 5'-Nucleotidase {ECO:0000313|EMBL:EYF07658.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
HAD family hydrolase
GD18-4_B1_scaffold_1769599_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30395..32554)
-----------------
DNA (2160bp)
protein (720aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6F1_SORC5
Thymidylate kinase {ECO:0000313|EMBL:AKF08283.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_1769599_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32622..35333
-----------------
DNA (2712bp)
protein (904aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GS37_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN93724.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1769599_30
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35337..35825)
-----------------
DNA (489bp)
protein (163aa)
Elongation factor GreAB {ECO:0000313|EMBL:KIA79359.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
rnk; prokaryotic transcription elongation factor GreA/GreB
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase id=12493619 bin=THIO_HI species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Displaying items 1-30 of 38 in total

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