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GD18-4_B1_scaffold_1920701

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1920701_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

413..628
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06587.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

664..843
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06586.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

878..1474
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06585.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1471..1998
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06584.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2000..3601
-----------------
DNA (1602bp)
protein (534aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06583.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3613..4149
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06582.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4154..5116
-----------------
DNA (963bp)
protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06581.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_8
unknown

Not on your lists

5672..6082
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_9
unknown

Not on your lists

comp(5947..6744)
-----------------
DNA (798bp)
protein (266aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_10
unknown

Not on your lists

7065..7754
-----------------
DNA (690bp)
protein (230aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_11
unknown

Not on your lists

comp(7926..8303)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_12
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8688..9980
-----------------
DNA (1293bp)
protein (431aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036B52B0
extracellular repeat-containing protein, HAF family
HAF repeat protein {ECO:0000313|EMBL:ACM20361.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
GD18-4_B1_scaffold_1920701_13
unknown

Not on your lists

comp(10087..10650)
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_14
unknown

Not on your lists

11095..12105
-----------------
DNA (1011bp)
protein (337aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13047..13241)
-----------------
DNA (195bp)
protein (65aa)
Prevent-host-death family protein id=4358009 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
prevent-host-death family protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_1920701_16
unknown

Not on your lists

13700..14809
-----------------
DNA (1110bp)
protein (370aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_17
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14922..15158
-----------------
DNA (237bp)
protein (79aa)
Tax=RBG_16_Gammaproteobacteria_66_13_curated
GD18-4_B1_scaffold_1920701_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15330..15524
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06586.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_1920701_19
unknown

Not on your lists

15688..17391
-----------------
DNA (1704bp)
protein (568aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17629..18429
-----------------
DNA (801bp)
protein (267aa)
Flp pilus assembly protein CpaB n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CRC9_DESK7
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EYF06580.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Flp pilus assembly protein CpaB
GD18-4_B1_scaffold_1920701_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18429..19823
-----------------
DNA (1395bp)
protein (465aa)
Flp pilus assembly protein, secretin CpaC n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K1C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EYF06579.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
outer membrane protein
GD18-4_B1_scaffold_1920701_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19834..21687
-----------------
DNA (1854bp)
protein (618aa)
secretion system protein E n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376C8A
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily {ECO:0000313|EMBL:EYF06578.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
tadA; flp pilus assembly ATPase
GD18-4_B1_scaffold_1920701_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21684..22550
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI000368EB22
Flp pilus assembly protein TadB {ECO:0000313|EMBL:EYF06577.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
type II secretion system protein f domain-containing protein
GD18-4_B1_scaffold_1920701_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22567..23478
-----------------
DNA (912bp)
protein (304aa)
Type II/IV secretion system protein TadC, associated with Flp pilus assembly {ECO:0000313|EMBL:EYF06576.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Type II secretion system protein id=4803559 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type II secretion system protein
GD18-4_B1_scaffold_1920701_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23721..23900
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05342.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_1920701_26
unknown

Not on your lists

23916..24041
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

GD18-4_B1_scaffold_1920701_27
Trypanosoma cruzi, Trypanosoma, Kinetoplastida, Eukaryota

Not on your lists

comp(24493..26028)
-----------------
DNA (1536bp)
protein (512aa)
Trans-sialidase, putative n=1 Tax=Trypanosoma cruzi (strain CL Brener) RepID=Q4DGT2_TRYCC
Trans-sialidase, putative {ECO:0000313|EMBL:EAN91735.1}; TaxID=353153 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum.;" source="Trypanosoma cruzi (strain CL Brener).;"
filamentous hemagglutinin family outer membrane protein
GD18-4_B1_scaffold_1920701_28
Oryza barthii, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(26089..27462)
-----------------
DNA (1374bp)
protein (458aa)
Vegetative cell wall protein gp1 n=2 Tax=Chlamydomonas reinhardtii RepID=GP1_CHLRE
Uncharacterized protein {ECO:0000313|EnsemblPlants:OBART05G07900.1}; TaxID=65489 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza barthii.;"
hypothetical protein
GD18-4_B1_scaffold_1920701_29
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27670..28740)
-----------------
DNA (1071bp)
protein (357aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PAZ6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX60286.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
GD18-4_B1_scaffold_1920701_30
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29008..30156)
-----------------
DNA (1149bp)
protein (383aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE78_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27024.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Displaying items 1-30 of 33 in total

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