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GD18-4_B1_scaffold_2082803

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_2082803_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..263
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F7L9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91549.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_2082803_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260..2143
-----------------
DNA (1884bp)
protein (628aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F7L5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91548.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_2082803_3
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2164..3120
-----------------
DNA (957bp)
protein (319aa)
Methanol dehydrogenase regulatory protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG78_9DELT
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:EDM75147.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
ATPase AAA
GD18-4_B1_scaffold_2082803_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3127..4443
-----------------
DNA (1317bp)
protein (439aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F7K7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91546.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_2082803_5
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..5361)
-----------------
DNA (882bp)
protein (294aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G636_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM78638.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
GD18-4_B1_scaffold_2082803_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5361..5702)
-----------------
DNA (342bp)
protein (114aa)
5-hydroxyisourate hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQ05_SORCE
5-Hydroxyisourate Hydrolase {ECO:0000313|EMBL:AKF09420.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
5-hydroxyisourate hydrolase
GD18-4_B1_scaffold_2082803_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5699..6220)
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJ21_9DELT
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
OHCU decarboxylase
GD18-4_B1_scaffold_2082803_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6217..7272)
-----------------
DNA (1056bp)
protein (352aa)
alc; bifunctional allantoicase/OHCU decarboxylase (EC:3.5.3.4)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813, ECO:0000313|EMBL:CAN96040.1};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Probable allantoicase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBG2_SORC5
GD18-4_B1_scaffold_2082803_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7330..8691)
-----------------
DNA (1362bp)
protein (454aa)
allB; allantoinase (EC:3.5.2.5)
Allantoinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8U4_SORC5
Allantoicase {ECO:0000313|EMBL:KFA88260.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
GD18-4_B1_scaffold_2082803_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8812..9186)
-----------------
DNA (375bp)
protein (125aa)
Putative nitrogen regulation protein n=1 Tax=Bordetella pertussis STO1-CHOC-0018 RepID=V9B7Y0_BORPT
two component, sigma54 specific, Fis family transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
GD18-4_B1_scaffold_2082803_11
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9341..10873
-----------------
DNA (1533bp)
protein (511aa)
Two-component regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZ29_9DELT
Histidine kinase {ECO:0000313|EMBL:KFA91158.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
response regulator/sensory box histidine kinase
GD18-4_B1_scaffold_2082803_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10879..12576
-----------------
DNA (1698bp)
protein (566aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHA1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF09596.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_2082803_13
unknown

Not on your lists

12689..13039
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

GD18-4_B1_scaffold_2082803_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13043..14116)
-----------------
DNA (1074bp)
protein (358aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
regulator of chromosome condensation RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ABU56397.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
GD18-4_B1_scaffold_2082803_15
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14305..16437
-----------------
DNA (2133bp)
protein (711aa)
Sensory box histidine kinase/response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TYG5_MYXSD
Histidine kinase {ECO:0000313|EMBL:AKF79107.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
sensory box histidine kinase/response regulator
GD18-4_B1_scaffold_2082803_16
unknown

Not on your lists

comp(16675..18534)
-----------------
DNA (1860bp)
protein (620aa)

This feature has no annotations

GD18-4_B1_scaffold_2082803_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18561..18953)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC76_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96150.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_2082803_18
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19297..20019)
-----------------
DNA (723bp)
protein (241aa)
murI; glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] id=15194506 bin=GWC2_NOV_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
radical SAM protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
GD18-4_B1_scaffold_2082803_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20050..20670)
-----------------
DNA (621bp)
protein (207aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobalamin-binding-like domain n=2 Tax=Geobacter metallireducens RepID=Q39V00_GEOMG
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
GD18-4_B1_scaffold_2082803_20
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20737..23190
-----------------
DNA (2454bp)
protein (818aa)
FG-GAP repeat/HVR domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAR1_9DELT
Hemolysin-related protein RbmC {ECO:0000313|EMBL:KIG18822.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
FG-GAP repeat-HVR domain-containing protein
GD18-4_B1_scaffold_2082803_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23424..25229
-----------------
DNA (1806bp)
protein (602aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5N2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08534.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_2082803_22
unknown

Not on your lists

25276..25785
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

GD18-4_B1_scaffold_2082803_23
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25796..26920)
-----------------
DNA (1125bp)
protein (375aa)
Adenosylhomocysteinase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JTL0_9GAMM
Adenosylhomocysteinase {ECO:0000313|EMBL:EKE77867.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
adenosylhomocysteinase
GD18-4_B1_scaffold_2082803_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27069..27476)
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP55_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46597.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying 24 items

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