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GD18-4_B1_scaffold_5133_17

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(25408..26595)

Top 3 Functional Annotations

Value Algorithm Source
rluD2; pseudouridylate synthase/ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 341.0
  • Bit_score: 355
  • Evalue 1.00e-95
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 341.0
  • Bit_score: 355
  • Evalue 5.00e-95
Pseudouridine synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIV4_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 341.0
  • Bit_score: 355
  • Evalue 3.60e-95

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCCGGGTTGGGACCGGTTGTTAGCACCGAACGCGCGCGCGGAGTATCAAGCTGCAGGCGAGGGGGCGGAAGGGCGGGGTCCCGCCCGCCCGCCGAACGGACGCCCGGGAACGGTCGAGAACGGAAAGATGCGCGACAAGGAGGCCGAGAAGAGCGTCGAGAGCTTCGTGCGCCCCGAGGTGGTCGATCCGGCCGCCACCCTGACCGTGGTGCGCGTGCCCAGGGAGTGGGCGCGGTGGCGCCTCGATCGCGTGGTGGTCCAGACCTTCCAGCGGATGAGCCGCACCCGCGCCCAGGTCGTCGTCACCGCCGGCGCGTTCACGCCCGAGGGGCGCAAGCTGCGCTCGAACGATCGGGTGCGCGAGGGCGACGTCATCCTGCTGTGGCGCCCGCCGTTCGAGGAGCCGGAGGTCCCGCTCGAGTGCCCGGTCATCCACGAGGACGATCGCCTGCTCGCGATCGACAAGCCGCCCGGCCTGCCGGTCCACCCGACCGCGCGCTACCACCACAAGACGGTGACCGCGCTGCTCGCGCGCGCGCGCCCGGGCGAGCTCCTCGCGCTCTGCCACCGCATCGATCGCGAGACCTCCGGCGCGCTGCTCCTCGCCAAGGACCGCGAGGCCGAGCGCTACGTGAAGCGCATGCTCGAGGAGCGCACCGAAGAGCGCGAGGGGGTGCGCGCGAAGGTCGACAAGACCTATCTGGCGATCACCTGGGGCGTGCCGCCCGAGCAGGAATTCCGGGTGACCCACGCGCTCAAGCTCGACGATCGGCACCGCTTCCGCGTGAAGATGCGCGTGGCCGACGGCGAGCGCGACGCGCTGTGGGCGGCCACGCGCTTCGAGATCCTCGGCGCGCGCGCGCGCCCGGGCGACCCGACGCGACGCTACGCGCTCGTTCGGTGCGAGCTCGAGACCGGGCGTCAGCACCAGATCCGCGCTCACCTCGCCGCGATCGGCACGCCGATCGTCGGCGACAAACTGTACGGCCCCGACGACGAGCTGTTCGCGCGCGGCGCCGACGGGACGCTCACCGAGGAGGATCAGGCGCTCCTCGAGCTGCCGCGCCACGCGCTGCACGCGCACGAGCTGGTGCTGCCGCACCCGTCGAACCCGCGCGAGCGCGTGACGATCCGCGCGCCGCTGCCCGCCGATCTCGCGGCGTTCTGGGACGCCCTGAGGGAGTGA
PROTEIN sequence
Length: 396
MPGWDRLLAPNARAEYQAAGEGAEGRGPARPPNGRPGTVENGKMRDKEAEKSVESFVRPEVVDPAATLTVVRVPREWARWRLDRVVVQTFQRMSRTRAQVVVTAGAFTPEGRKLRSNDRVREGDVILLWRPPFEEPEVPLECPVIHEDDRLLAIDKPPGLPVHPTARYHHKTVTALLARARPGELLALCHRIDRETSGALLLAKDREAERYVKRMLEERTEEREGVRAKVDKTYLAITWGVPPEQEFRVTHALKLDDRHRFRVKMRVADGERDALWAATRFEILGARARPGDPTRRYALVRCELETGRQHQIRAHLAAIGTPIVGDKLYGPDDELFARGADGTLTEEDQALLELPRHALHAHELVLPHPSNPRERVTIRAPLPADLAAFWDALRE*