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GD18-4_B1_scaffold_5133

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_5133_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120..3017)
-----------------
DNA (2898bp)
protein (966aa)
Translation initiation factor IF-2 n=1 Tax=Geobacter sp. (strain M21) RepID=IF2_GEOSM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
infB; translation initiation factor IF-2
GD18-4_B1_scaffold_5133_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3014..3664)
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G891_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95962.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_5133_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3714..5336)
-----------------
DNA (1623bp)
protein (541aa)
Antitermination factor NusA n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLN4_SORCE
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
antitermination factor NusA
GD18-4_B1_scaffold_5133_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..6013)
-----------------
DNA (681bp)
protein (227aa)
Ribosome maturation factor RimP n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0W6_SORCE
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ribosome maturation factor RimP
GD18-4_B1_scaffold_5133_5
unknown

Not on your lists

6259..6885
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

GD18-4_B1_scaffold_5133_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6970..8517
-----------------
DNA (1548bp)
protein (516aa)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Glycerol kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5A4_SORC5
glpK; hypothetical protein
GD18-4_B1_scaffold_5133_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8620..9420
-----------------
DNA (801bp)
protein (267aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5A8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97787.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_5133_8
unknown

Not on your lists

9417..10085
-----------------
DNA (669bp)
protein (223aa)

This feature has no annotations

GD18-4_B1_scaffold_5133_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10095..11501
-----------------
DNA (1407bp)
protein (469aa)
gabT2; 4-aminobutyrate transaminase (EC:2.6.1.19)
4-aminobutyrate transaminase {ECO:0000313|EMBL:CAN98795.1}; EC=2.6.1.19 {ECO:0000313|EMBL:CAN98795.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
4-aminobutyrate transaminase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZV7_SORC5
GD18-4_B1_scaffold_5133_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11498..12634
-----------------
DNA (1137bp)
protein (379aa)
Putative acyl-protein synthetase, LuxE n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZV3_SORC5
Putative acyl protein synthase/acyl-CoA reductase-like protein {ECO:0000313|EMBL:EYF02337.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
acyl-protein synthetase, LuxE
GD18-4_B1_scaffold_5133_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12631..13695
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEL7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41313.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_5133_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13790..15238)
-----------------
DNA (1449bp)
protein (483aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAU5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92911.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_5133_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15235..19737)
-----------------
DNA (4503bp)
protein (1501aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAU7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF07514.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_5133_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19821..20456
-----------------
DNA (636bp)
protein (212aa)
Fimbrial protein pilA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F200_SORC5
pilA1; fimbrial protein pilA
Fimbrial protein pilA {ECO:0000313|EMBL:CAN94436.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_5133_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20522..22402
-----------------
DNA (1881bp)
protein (627aa)
D-alanyl-D-alanine carboxypeptidase family n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4FYY3_MICAE
Putative peptidoglycan binding domain 1 {ECO:0000313|EMBL:EYF04945.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
peptidoglycan-binding domain 1 protein
GD18-4_B1_scaffold_5133_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22570..25407
-----------------
DNA (2838bp)
protein (946aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7V3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40939.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_5133_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25408..26595)
-----------------
DNA (1188bp)
protein (396aa)
rluD2; pseudouridylate synthase/ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Pseudouridine synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIV4_SORC5
GD18-4_B1_scaffold_5133_18
Acinetobacter calcoaceticus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26597..27634
-----------------
DNA (1038bp)
protein (346aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1217653 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter calcoaceticus ANC 3680.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Acinetobacter calcoaceticus ANC 3680 RepID=N9EK07_ACICA
GD18-4_B1_scaffold_5133_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27696..29552
-----------------
DNA (1857bp)
protein (619aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH76_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN96422.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_5133_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29660..30142)
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZL6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37924.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_5133_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30142..30369)
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y177_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37925.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_5133_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30509..31516)
-----------------
DNA (1008bp)
protein (336aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUW1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36136.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_5133_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31846..32805
-----------------
DNA (960bp)
protein (320aa)
Diguanylate cyclase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIH8_SORCE
FHA domain/GGDEF domain protein {ECO:0000313|EMBL:AKF06678.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
diguanylate cyclase
GD18-4_B1_scaffold_5133_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32806..33675)
-----------------
DNA (870bp)
protein (290aa)
Putative phosphonate-binding protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UN16_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:EYF07448.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
putative phosphonate-binding protein
GD18-4_B1_scaffold_5133_25
unknown

Not on your lists

33748..34458
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

GD18-4_B1_scaffold_5133_26
unknown

Not on your lists

comp(35072..35677)
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

GD18-4_B1_scaffold_5133_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36091..37023
-----------------
DNA (933bp)
protein (311aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFL2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF04051.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_5133_28
unknown

Not on your lists

37090..38046
-----------------
DNA (957bp)
protein (319aa)

This feature has no annotations

GD18-4_B1_scaffold_5133_29
unknown

Not on your lists

38043..38483
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

GD18-4_B1_scaffold_5133_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38666..40450
-----------------
DNA (1785bp)
protein (595aa)
30S ribosomal protein S1 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI17_SORCE
SSU ribosomal protein S1p {ECO:0000313|EMBL:EYF01979.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
30S ribosomal protein S1
Displaying items 1-30 of 43 in total

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