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GD18-4_B1_scaffold_16643_6

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(5294..5896)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein id=2314580 bin=GWA2_OP3_52_12 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 184.0
  • Bit_score: 187
  • Evalue 1.10e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 184.0
  • Bit_score: 186
  • Evalue 4.10e-45
Tax=RBG_16_Gamma2_60_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 188.0
  • Bit_score: 188
  • Evalue 9.20e-45

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Taxonomy

RBG_16_Gamma2_60_9_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGAAGCTTCCGCTGCAGATCACGTTCCGCGACCTCGACTCCTCCCAAGCGCTGACCGACGCGGTGCGCCGGCGCGCCGAGCGGCTCGACGCCGTTTGCGATCGCCTCATCAGTTGCCGCGTCGCCATCGAGGCGCCGAACCGGCACACCCATCACGGTCCGTCCCAGTACCACGTGCGCGTCGACGTGAAGGCGCCCGGCGTCGAGCTCGTCTCGAGCCACACGCCCCCCGACGTGAAGCCGGACCTGTACGTGCTGATCGATCAGGCGTTCGACGACATGGAGCGGCAGGTCGAGGACTGGATCCGCATGGCCCGTTGGGACGTCAAACGCCACGGCCGCGCCCCGCACGCGCGCGTGGCGAAGATCTTCCGCGCGCGCGGCTACGGCTTCCTCGAGGCGCCCGACGGTCGCGAGATCTACTTCCACCGGAACAGCGTCTTGAAGAACAGGTTCGATCAGCTGGAGGTCGGGATGGAGGTCCGCTTCGCCGAGGAGGACGGCGACAAGGGGCCGCAGGCGAGCACCGTCGACATCGTGGGCAAGCCGCGCCGGGCGCCGACGATGGCGACCGACGACATGGAGCGGCCGTCGTTCATTTGA
PROTEIN sequence
Length: 201
MKLPLQITFRDLDSSQALTDAVRRRAERLDAVCDRLISCRVAIEAPNRHTHHGPSQYHVRVDVKAPGVELVSSHTPPDVKPDLYVLIDQAFDDMERQVEDWIRMARWDVKRHGRAPHARVAKIFRARGYGFLEAPDGREIYFHRNSVLKNRFDQLEVGMEVRFAEEDGDKGPQASTVDIVGKPRRAPTMATDDMERPSFI*