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GD18-4_B1_scaffold_16643

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_16643_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95..1450)
-----------------
DNA (1356bp)
protein (452aa)
Argininosuccinate synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDT5_ANADF
Argininosuccinate synthase {ECO:0000313|EMBL:AKF04954.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
argininosuccinate synthase
GD18-4_B1_scaffold_16643_2
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1754..2404
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Thermus oshimai JL-2 RepID=K7QWL3_THEOS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV75948.1}; Flags: Precursor;; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
GD18-4_B1_scaffold_16643_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2490..4214
-----------------
DNA (1725bp)
protein (575aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G3J9_9GAMM
cartilage oligomeric matrix protein
Cartilage oligomeric matrix protein {ECO:0000313|EMBL:BAP57361.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
GD18-4_B1_scaffold_16643_4
unknown

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comp(4215..4478)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

GD18-4_B1_scaffold_16643_5
unknown

Not on your lists

comp(4670..5128)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

GD18-4_B1_scaffold_16643_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5294..5896)
-----------------
DNA (603bp)
protein (201aa)
Cold-shock protein DNA-binding protein id=2314580 bin=GWA2_OP3_52_12 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
GD18-4_B1_scaffold_16643_7
unknown

Not on your lists

5943..6995
-----------------
DNA (1053bp)
protein (351aa)

This feature has no annotations

GD18-4_B1_scaffold_16643_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6992..7759
-----------------
DNA (768bp)
protein (256aa)
Enoyl-CoA hydratase n=1 Tax=Patulibacter medicamentivorans RepID=H0DZY2_9ACTN
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKF06566.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
enoyl-CoA hydratase/isomerase
GD18-4_B1_scaffold_16643_9
unknown

Not on your lists

7908..8297
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

GD18-4_B1_scaffold_16643_10
unknown

Not on your lists

8344..8892
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

GD18-4_B1_scaffold_16643_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8893..10041)
-----------------
DNA (1149bp)
protein (383aa)
Putative phosphonate-binding protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PRH9_9DELT
Phosphonate ABC transporter phosphate-binding periplasmic component {ECO:0000313|EMBL:AKF07152.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
putative phosphonate-binding protein
GD18-4_B1_scaffold_16643_12
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10198..10413
-----------------
DNA (216bp)
protein (72aa)
Heavy metal transport/detoxification protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1L9_DEHLB
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ADJ26497.1}; TaxID=552811 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061; / BL-DC-9).;"
GD18-4_B1_scaffold_16643_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10410..12791
-----------------
DNA (2382bp)
protein (794aa)
Copper-translocating P-type ATPase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCG1_ANASK
copper-translocating P-type ATPase
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ACG74797.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
GD18-4_B1_scaffold_16643_14
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12843..14852
-----------------
DNA (2010bp)
protein (670aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EPK9_SORC5
hypothetical protein
Tax=CG_Delta_07
GD18-4_B1_scaffold_16643_15
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15045..17705
-----------------
DNA (2661bp)
protein (887aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5X3_9DELT
hypothetical protein
Tax=CG_Delta_07
GD18-4_B1_scaffold_16643_16
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17745..19562)
-----------------
DNA (1818bp)
protein (606aa)
Putative polysaccharide-binding protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21P73_SACD2
cbm6A; putative polysaccharide-binding protein
Putative polysaccharide-binding protein {ECO:0000313|EMBL:ABD79506.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
GD18-4_B1_scaffold_16643_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19889..20683)
-----------------
DNA (795bp)
protein (265aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021S9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84296.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
GD18-4_B1_scaffold_16643_18
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20821..21468
-----------------
DNA (648bp)
protein (216aa)
Putative lactone-dependent transcriptional regulator (Tetr-family), mmfr n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFJ7_9DELT
Putative lactone-dependent transcriptional regulator (Tetr-family), mmfr {ECO:0000313|EMBL:EDM75369.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
putative lactone-dependent transcriptional regulator (tetr-family), mmfr
GD18-4_B1_scaffold_16643_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21472..23394
-----------------
DNA (1923bp)
protein (641aa)
putative acyl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFJ6_9DELT
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AKF05088.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_16643_20
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23399..24289
-----------------
DNA (891bp)
protein (297aa)
Putative (R)-specific enoyl-CoA hydratase, MaoC-like protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFJ5_9DELT
Putative (R)-specific enoyl-CoA hydratase, MaoC-like protein {ECO:0000313|EMBL:EDM75367.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
MaoC domain-containing protein dehydratase
GD18-4_B1_scaffold_16643_21
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24494..25894
-----------------
DNA (1401bp)
protein (467aa)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFJ4_9DELT
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:KIG16305.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
fabG; 3-ketoacyl-ACP reductase
GD18-4_B1_scaffold_16643_22
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26073..27359
-----------------
DNA (1287bp)
protein (429aa)
Acetyl-CoA acyltransferase n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EL21_NOCAS
Acetyl-CoA acyltransferase {ECO:0000313|EMBL:GAD85799.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
fadA9; acyl-CoA thiolase
GD18-4_B1_scaffold_16643_23
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27361..27849
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00037E54D0
Uncharacterized protein {ECO:0000313|EMBL:KEI69507.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.;"
hypothetical protein
GD18-4_B1_scaffold_16643_24
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27846..29033
-----------------
DNA (1188bp)
protein (396aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TZH1_MARAV
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ABM18140.1}; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 /; VT8).;"
GD18-4_B1_scaffold_16643_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29099..29602
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMB5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00897.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
GD18-4_B1_scaffold_16643_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29941..30837
-----------------
DNA (897bp)
protein (299aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B68D6B
Uncharacterized protein {ECO:0000313|EMBL:AKF08943.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_16643_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30837..31775
-----------------
DNA (939bp)
protein (313aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PL08_9ZZZZ
Membrane protein, putative {ECO:0000313|EMBL:AKF08942.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_16643_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31779..33797)
-----------------
DNA (2019bp)
protein (673aa)
Putative phosphohydrolase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6APK0_9BACT
Putative phosphoesterase {ECO:0000313|EMBL:AKF08941.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
phosphohydrolase
GD18-4_B1_scaffold_16643_29

Not on your lists

comp(34244..36631)
-----------------
DNA (2388bp)
protein (796aa)
Uncharacterized protein {ECO:0000313|EMBL:AHN97884.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
PAS/PAC sensor hybrid histidine kinase id=3414283 bin=GWC2_Deltaproteobacteria_66_88 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
GD18-4_B1_scaffold_16643_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36604..37086)
-----------------
DNA (483bp)
protein (161aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF88_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN93117.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 36 in total

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