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GD18-4_B1_scaffold_38975_30

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 33221..34237

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EYF04414.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 328.0
  • Bit_score: 259
  • Evalue 4.20e-66
Extracellular solute-binding protein, family 7 id=4381727 bin=GWA2_Elusimicrobia_66_18 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 323.0
  • Bit_score: 130
  • Evalue 2.10e-27
periplasmic C4-dicarboxylate binding protein DctP similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 311.0
  • Bit_score: 117
  • Evalue 4.00e-24

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGATTCGTAAGGTCCTTGTGGGGGTGAGCGCGGCCGCGGCTTTGCTGGCGCTCTCCGCCGGCAGCGCGCAAGCGCAGACGAAGCTGAAGATCGGCACGCCCGCCGCGCCGGAGTCGCCGTGGGGTCAGGTGTTCAAGACGTGGAAGAAAGCCGTCGAGGCGAAGACGAACAACGCCGTCTCGTTCGACTTCTTCTTCAACTCGACCCAGGGCACCGAGTCCACGATGGTCGACAAGATGAAGGCCGGCCAGCTCGACGGCGCCGCCCTCACCTCCGTCGGTCTCGGGAAGATCGACAAGCGCCTGCTGGCGATCCAGGTCCCGGGCGCGGTGCGTTCGTGGAAGGCCGTCGACGCCGTTCGCGCGGCGATCGGCCCCGAGTACGACAAGTTCCTCACCGACAAGAAGTTCGTCCCGATCGCGTACGCCGACGTCGGTCAGGCGCACTTCCTCTCGAAGGGCTTCGCCGTCCACCAGCCCGACGACCTCAAGGGCAAGTCACCGTGGGTCTACTCCGAGGACCCGATCCTCAAGACTGTCTACGCGAAGATCGGCGGCGTGAACCCGTTCCCCGCCGAGCTGATGAGCGTTCTGCCGAACATCGACAACGGCAAGATCAACTGCCTGAGCATCGGCGCGCTCGCCGCCGAGATGCTCCAGTGGAACAGCAAGTTCGACAACGCCGTCGATCAGGTCAACGCCATCCTCGTCGGCGGTCTGGTCATGTCGACCGACTCGCTCGACAAGCTCCCCGGCGACCAGAAGGCCGCCGTCCTCGACACCGGCAAGTCGATGGTCACCGCGGCCACCGGCCTCAAGAACCGCATCCGCAACGAGGACGCGGCGGCCTGGAACCGCTTCAAGTCCCGCACCGGCGTCACCATCTACGCGCCGACCGCCGACGACATCGCGAAGTGGGAGGTCGTCTTCAAGGCCTCGCGCGACGCGCTCAAGGCCGGCACGTTCGACCCCGGGCTCGTCTCGAAGATCGAGTCGGTCGGCGCCGCGAACAAGTGA
PROTEIN sequence
Length: 339
MIRKVLVGVSAAAALLALSAGSAQAQTKLKIGTPAAPESPWGQVFKTWKKAVEAKTNNAVSFDFFFNSTQGTESTMVDKMKAGQLDGAALTSVGLGKIDKRLLAIQVPGAVRSWKAVDAVRAAIGPEYDKFLTDKKFVPIAYADVGQAHFLSKGFAVHQPDDLKGKSPWVYSEDPILKTVYAKIGGVNPFPAELMSVLPNIDNGKINCLSIGALAAEMLQWNSKFDNAVDQVNAILVGGLVMSTDSLDKLPGDQKAAVLDTGKSMVTAATGLKNRIRNEDAAAWNRFKSRTGVTIYAPTADDIAKWEVVFKASRDALKAGTFDPGLVSKIESVGAANK*