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GD18-4_B1_scaffold_38975

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_38975_1
unknown

Not on your lists

comp(1..69)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128..2047
-----------------
DNA (1920bp)
protein (640aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTQ7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33953.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_38975_3
unknown

Not on your lists

2382..2564
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2567..2848)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P9Q2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX59002.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
GD18-4_B1_scaffold_38975_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2884..3591
-----------------
DNA (708bp)
protein (236aa)
gst; glutathione S-transferase (EC:2.5.1.18)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B7516D
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
GD18-4_B1_scaffold_38975_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3930..4622
-----------------
DNA (693bp)
protein (231aa)
Serine/threonine kinase family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CE83_MYXFH
serine/threonine kinase family protein
Serine/threonine kinase family protein {ECO:0000313|EMBL:AEI63544.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
GD18-4_B1_scaffold_38975_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4730..5935)
-----------------
DNA (1206bp)
protein (402aa)
GAF sensor hybrid histidine kinase id=2475645 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GD18-4_B1_scaffold_38975_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5985..6917
-----------------
DNA (933bp)
protein (311aa)
Anti-anti sigma factor protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EVT1_SORC5
anti-anti sigma factor protein
Anti-anti sigma factor protein {ECO:0000313|EMBL:CAN94254.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_38975_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6914..7297
-----------------
DNA (384bp)
protein (128aa)
Anti-sigma-factor antagonist n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8G5_ANADF
anti-sigma-factor antagonist
Anti-sigma-factor antagonist {ECO:0000313|EMBL:ABS25011.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_38975_10
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7312..7725
-----------------
DNA (414bp)
protein (138aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y4F0_THEBD
putative anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ADG87204.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
GD18-4_B1_scaffold_38975_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7710..8732
-----------------
DNA (1023bp)
protein (341aa)
transcriptional regulator n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003802001
stage ii sporulation protein e
Stage II sporulation protein E {ECO:0000313|EMBL:ADL43886.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
GD18-4_B1_scaffold_38975_12
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8999..10576
-----------------
DNA (1578bp)
protein (526aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SIP1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK88420.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
response regulator/GGDEF domain-containing protein
GD18-4_B1_scaffold_38975_13
unknown

Not on your lists

10700..10999
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_14
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

11026..11763
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644F67
Membrane protein, PF09997 family
Tax=RIFOXYD2_FULL_OD1_52_8_curated
GD18-4_B1_scaffold_38975_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11636..15343)
-----------------
DNA (3708bp)
protein (1236aa)
ATPase/protein kinase family protein n=2 Tax=Singulisphaera acidiphila RepID=L0D8J3_SINAD
ATPase/protein kinase family protein
ATPase/protein kinase family protein {ECO:0000313|EMBL:AGA25552.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
GD18-4_B1_scaffold_38975_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15483..17075
-----------------
DNA (1593bp)
protein (531aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UA67_ANASK
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GD18-4_B1_scaffold_38975_17
unknown

Not on your lists

comp(17087..17260)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17257..19266)
-----------------
DNA (2010bp)
protein (670aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
malto-oligosyltrehalose trehalohydrolase id=24548385 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
malto-oligosyltrehalose trehalohydrolase
GD18-4_B1_scaffold_38975_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19289..21448)
-----------------
DNA (2160bp)
protein (720aa)
Glycogen debranching enzyme GlgX n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4B9_MYXSD
Glycogen debranching protein {ECO:0000313|EMBL:AKF80160.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
glycogen debranching enzyme GlgX
GD18-4_B1_scaffold_38975_20
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21445..24609)
-----------------
DNA (3165bp)
protein (1055aa)
Maltooligosyltrehalose synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWW6_CORCM
treY; maltooligosyltrehalose synthase
Maltooligosyltrehalose synthase {ECO:0000313|EMBL:AFE10531.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
GD18-4_B1_scaffold_38975_21
Listeria weihenstephanensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24793..25215
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:EUJ35841.1}; TaxID=1265845 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria weihenstephanensis FSL R9-0317.;"
GD18-4_B1_scaffold_38975_22
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25607..25912)
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0V8_RAMTT
Stress-induced protein {ECO:0000313|EMBL:AKH37736.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
GD18-4_B1_scaffold_38975_23
unknown

Not on your lists

26347..27018
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_24
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27564..28367)
-----------------
DNA (804bp)
protein (268aa)
Putative uncharacterized protein id=2178945 bin=GWB2_Clostridiales_37_7 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
GD18-4_B1_scaffold_38975_25
unknown

Not on your lists

comp(28422..29525)
-----------------
DNA (1104bp)
protein (368aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29573..30199)
-----------------
DNA (627bp)
protein (209aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y838_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40541.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_38975_27
unknown

Not on your lists

comp(30199..30579)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

GD18-4_B1_scaffold_38975_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30600..31925
-----------------
DNA (1326bp)
protein (442aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESP3_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF05813.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_38975_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31976..33001
-----------------
DNA (1026bp)
protein (342aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7F8_ANADF
Uncharacterized protein {ECO:0000313|EMBL:EYF05444.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_38975_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33221..34237
-----------------
DNA (1017bp)
protein (339aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EYF04414.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Extracellular solute-binding protein, family 7 id=4381727 bin=GWA2_Elusimicrobia_66_18 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
periplasmic C4-dicarboxylate binding protein DctP
Displaying items 1-30 of 62 in total

View Taxonomy