ggKbase home page

GD18-4_B1_scaffold_44781_87

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(91261..91431)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C865_DESTA similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 56.0
  • Bit_score: 83
  • Evalue 6.40e-14
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 56.0
  • Bit_score: 83
  • Evalue 1.80e-14
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 56.0
  • Bit_score: 83
  • Evalue 9.00e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfomonile tiedjei → Desulfomonile → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
GTGCTGCGCCTGCTTTTCGGCATCGACGAGGAGGGCGACCACACGCTCGAAGAGGTCGGCCAGATGTTCGAGGCCACCCGCGAGCGCGTGCGGCAGATCGAGGCCAAGGCGCTGAGAAAGTTTCGGCACCCGCGCTACGCGAAGCGGCTGCGCCCGTACAACGAGGGGTGA
PROTEIN sequence
Length: 57
VLRLLFGIDEEGDHTLEEVGQMFEATRERVRQIEAKALRKFRHPRYAKRLRPYNEG*