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GD18-4_B1_scaffold_748596_17

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(18151..18972)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=3 Tax=Anaeromyxobacter RepID=B8JDV3_ANAD2 id=5225651 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 285.0
  • Bit_score: 129
  • Evalue 4.90e-27
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 284.0
  • Bit_score: 118
  • Evalue 1.90e-24
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 285.0
  • Bit_score: 128
  • Evalue 9.10e-27

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 822
GTGCGCGACGAAGACGACGACCACCTCCTGACGATTGCCCGCGCGGGCGATCGCGCGGCGGCGGCGGCGTTCGTCGAGCGGAACGCGCCGGCCGTCGGGCGCCTGGCGCGCGCGATCGTCGGCGACGGCGCCGCGGCCGACGACGTGCTGCAGGAGACCTTCGCGCGCGCGTTCCGCGCGCTCGACACGTTCGATGAGGCACGGGGTGGCGCGCGACCGTGGCTGTTCGCGATCGCGCGCCACGCCGCGTTCGAGCAGCTCCATCGCAGGCGCGAGCGACCGGTGGGCGACGCGGCCGACGTCGAGCCGATGATGGCGCTCGGCGTCGCCGCCGGCTGGGGCGCCTCGCCCGACCGGGCGCTCGCCCGCGCCATCCAGCGCGACGATCTGGCGCGCGCGCTCGCCTCGCTCGCGGCGCACGATCGCGAGGTGATCGTGCTGCGCGATCTCGAGGGGCTCTCCGGCGAAGAGGTCGCCGATCAGCTGAGCCTCGACCTTCGGGCGATGAAGAGCCGGTTGCACCGCGCGCGCCTGCGGCTGCTCGCGGCGGTGAAGGGTATCGAGGAGGGCGTGGTGAGCCAGGAACGCAACGCCGGTGGGATGAGGTGCTCCGAGGTCCTCGCCGTCCTCGGTGATTACGTCGACGGCGAGCTCGGTCCGACCGATCGGGTGCGCGTCGAACAGCACGTCCGCGAGTGCTCGGTGTGCGAGCGCTTCGGCGGGCGCTTCTCCGGCGTCGTGCACGACGTGCGCGAGAAGCTCGGCGCGCCGCCGGCCATCGATCCGGCCGTCCTCGAGGCGATCCGCGCGCGGCTCGCGTGA
PROTEIN sequence
Length: 274
VRDEDDDHLLTIARAGDRAAAAAFVERNAPAVGRLARAIVGDGAAADDVLQETFARAFRALDTFDEARGGARPWLFAIARHAAFEQLHRRRERPVGDAADVEPMMALGVAAGWGASPDRALARAIQRDDLARALASLAAHDREVIVLRDLEGLSGEEVADQLSLDLRAMKSRLHRARLRLLAAVKGIEEGVVSQERNAGGMRCSEVLAVLGDYVDGELGPTDRVRVEQHVRECSVCERFGGRFSGVVHDVREKLGAPPAIDPAVLEAIRARLA*