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GD18-4_B1_scaffold_748596

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_748596_1
unknown

Not on your lists

comp(137..748)
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_2
unknown

Not on your lists

comp(735..1334)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1422..3656)
-----------------
DNA (2235bp)
protein (745aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPM8_SORCE
polynucleotide phosphorylase
GD18-4_B1_scaffold_748596_4
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4005..4274)
-----------------
DNA (270bp)
protein (90aa)
30S ribosomal protein S15 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RS15_PELCD
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
GD18-4_B1_scaffold_748596_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4368..5051
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXM1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97465.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_748596_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5199..6470
-----------------
DNA (1272bp)
protein (424aa)
traM; SAM-dependent methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferases n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXL3_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF04430.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_748596_7
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6467..7042
-----------------
DNA (576bp)
protein (192aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ07_9RHIZ
Haloacid dehalogenase {ECO:0000313|EMBL:KJK53889.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
Hydrolase
GD18-4_B1_scaffold_748596_8
unknown

Not on your lists

7095..7319
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_9
unknown

Not on your lists

comp(7323..8024)
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8280..11129
-----------------
DNA (2850bp)
protein (950aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPQ8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34411.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_748596_11
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..11380
-----------------
DNA (237bp)
protein (79aa)
AsnC family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D44BB
Lrp protein {ECO:0000313|EMBL:BAQ44532.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
AsnC family transcriptional regulator
GD18-4_B1_scaffold_748596_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11518..13878
-----------------
DNA (2361bp)
protein (787aa)
Putative lipoprotein-like protein n=1 Tax=Adineta vaga RepID=B3G4E2_ADIVA
Uncharacterized protein {ECO:0000313|EMBL:ABS27080.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
hypothetical protein
GD18-4_B1_scaffold_748596_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13879..15276)
-----------------
DNA (1398bp)
protein (466aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNA6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34034.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_748596_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15431..16021
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein, partial n=1 Tax=Actinoplanes globisporus RepID=UPI00036A59B6
5'-nucleotidase {ECO:0000313|EMBL:AKF04603.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_748596_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16146..17075
-----------------
DNA (930bp)
protein (310aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G1B5_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN92492.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_748596_16

Not on your lists

17068..18150
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL24850.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=2124195 bin=GWA2_Elusimicrobia_69_24 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
GD18-4_B1_scaffold_748596_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18151..18972)
-----------------
DNA (822bp)
protein (274aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=3 Tax=Anaeromyxobacter RepID=B8JDV3_ANAD2 id=5225651 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ECF subfamily RNA polymerase sigma factor
Tax=RBG_16_RIF_WS3X_71_46_curated
GD18-4_B1_scaffold_748596_18
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18942..19157)
-----------------
DNA (216bp)
protein (72aa)
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EK22_ACIF5
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_748596_19
unknown

Not on your lists

19299..20357
-----------------
DNA (1059bp)
protein (353aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_20
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20318..20755)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TYW3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK90764.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
GD18-4_B1_scaffold_748596_21
unknown

Not on your lists

20908..21210
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21254..22507
-----------------
DNA (1254bp)
protein (418aa)
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI42_SORCE
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:AGP32812.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_748596_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22495..23274
-----------------
DNA (780bp)
protein (260aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ERP6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF08081.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_748596_24
Oryza barthii, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(23970..24704)
-----------------
DNA (735bp)
protein (245aa)
Os11g0677400 protein n=1 Tax=Oryza sativa subsp. japonica RepID=Q2QZQ3_ORYSJ
Uncharacterized protein {ECO:0000313|EnsemblPlants:OBART11G22520.1}; TaxID=65489 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza barthii.;"
GD18-4_B1_scaffold_748596_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24783..25361
-----------------
DNA (579bp)
protein (193aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
2'-5' RNA ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7I0_ANADF
2'-5' RNA ligase
GD18-4_B1_scaffold_748596_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25339..26019)
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEF9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF05571.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_748596_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26016..26948)
-----------------
DNA (933bp)
protein (311aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8N0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41234.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_748596_28
unknown

Not on your lists

27000..27539
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

GD18-4_B1_scaffold_748596_29
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27541..28134
-----------------
DNA (594bp)
protein (198aa)
DNA mismatch repair protein MutT
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AJE02027.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
NUDIX hydrolase id=14626121 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
GD18-4_B1_scaffold_748596_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28634..29398)
-----------------
DNA (765bp)
protein (255aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIG8_SORCE
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:EYF08402.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Displaying items 1-30 of 43 in total

View Taxonomy