ggKbase home page

GD18-4_B1_scaffold_1334202

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1334202_1
unknown

Not on your lists

2..211
DNA (210bp) protein (70aa)

This feature has no annotations

GD18-4_B1_scaffold_1334202_2
GWB1_OP11_39_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

169..390
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037EE874
Transcriptional regulator {ECO:0000313|EMBL:KKQ91233.1}; TaxID=1618572 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_10.;"
Helix-turn-helix.
GD18-4_B1_scaffold_1334202_3
RIFOXYD2_FULL_RIF_OD1_11_36_9_curated, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

387..1580
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Prevotella amnii RepID=UPI0003716154
restriction endonuclease Hin4II
Tax=RIFOXYD2_FULL_RIF_OD1_11_36_9_curated
GD18-4_B1_scaffold_1334202_4
GWA2_OD1_43_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1577..4117)
DNA (2541bp) protein (847aa)
Cytosine-specific methyltransferase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NTR3_BACSE
Cytosine-specific methyltransferase {ECO:0000313|EMBL:KKS99365.1}; TaxID=1618738 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_43_15.;"
restriction endonuclease Eco57I
GD18-4_B1_scaffold_1334202_5
RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4159..4827)
DNA (669bp) protein (223aa)
LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] id=131032 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated
GD18-4_B1_scaffold_1334202_6
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4928..5845
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VWH4_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO14605.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
hypothetical protein
GD18-4_B1_scaffold_1334202_7
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

5850..6146
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW15405.1}; TaxID=1618665 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
GD18-4_B1_scaffold_1334202_8
unknown

Not on your lists

comp(6460..6693)
DNA (234bp) protein (78aa)

This feature has no annotations

GD18-4_B1_scaffold_1334202_9
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6995..7360
DNA (366bp) protein (122aa)
id=2169594 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
GD18-4_B1_scaffold_1334202_10
unknown

Not on your lists

7396..8274
DNA (879bp) protein (293aa)

This feature has no annotations

GD18-4_B1_scaffold_1334202_11
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

8493..8657
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363B5ED
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
GD18-4_B1_scaffold_1334202_12
unknown

Not on your lists

comp(8626..8823)
DNA (198bp) protein (66aa)

This feature has no annotations

GD18-4_B1_scaffold_1334202_13
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

8872..9171
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CVT8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
GD18-4_B1_scaffold_1334202_14
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

9181..9390
DNA (210bp) protein (70aa)
id=5045887 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
GD18-4_B1_scaffold_1334202_15
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

9387..11576
DNA (2190bp) protein (730aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YL23_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
GD18-4_B1_scaffold_1334202_16
unknown

Not on your lists

11695..12651
DNA (957bp) protein (319aa)

This feature has no annotations

GD18-4_B1_scaffold_1334202_17
unknown

Not on your lists

12664..13104
DNA (441bp) protein (147aa)

This feature has no annotations

GD18-4_B1_scaffold_1334202_18
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

13106..14620
DNA (1515bp) protein (505aa)
Spermine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHX1_SYNFM
Spermine synthase {ECO:0000313|EMBL:KKP57535.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
spermine synthase
GD18-4_B1_scaffold_1334202_19
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

14755..15828
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035D4EA1
glutamine synthetase
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
GD18-4_B1_scaffold_1334202_20
GWC2_OD1_i_40_12, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

15899..16507
DNA (609bp) protein (203aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKR44039.1}; TaxID=1618699 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_40_12.;"
NUDIX hydrolase id=1911703 bin=GWD2_CPR2_39_7 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
NTP pyrophosphohydrolase
GD18-4_B1_scaffold_1334202_21
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16536..17726
DNA (1191bp) protein (397aa)
Hydrolase {ECO:0000313|EMBL:GAN34247.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hydrolase id=3564756 bin=GWC1_Spirochaetes_27_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hydrolase
GD18-4_B1_scaffold_1334202_22
GWA2_OD1_56_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

17740..18675
DNA (936bp) protein (312aa)
Adenosine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QCW9_9DELT
PfkB {ECO:0000313|EMBL:KKW42841.1}; TaxID=1619044 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_56_11.;"
PfkB family protein
GD18-4_B1_scaffold_1334202_23
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

18653..20071
DNA (1419bp) protein (473aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=uncultured bacterium RepID=K1YJ76_9BACT
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
GD18-4_B1_scaffold_1334202_24
RLO_OD1_Nomurabacteria_46_14, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20177..20806
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y6T8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_46_14_curated
GD18-4_B1_scaffold_1334202_25
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

20818..21192
DNA (375bp) protein (125aa)
hypothetical protein
id=5103514 bin=GW2011_AR20_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
GD18-4_B1_scaffold_1334202_26
GWB1_OD1_42_17, Azambacteria, Parcubacteria, Bacteria

Not on your lists

21189..22022
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036EDFC4
Uncharacterized protein {ECO:0000313|EMBL:KKS44246.1}; TaxID=1618615 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_42_17.;"
hypothetical protein
GD18-4_B1_scaffold_1334202_27
GWA2_OD1_41_14_partial, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

22070..23500
DNA (1431bp) protein (477aa)
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:KKR91878.1}; TaxID=1618635 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWA2_41_14.;"
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein id=99242 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
extracellular solute-binding protein
GD18-4_B1_scaffold_1334202_28
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23532..24566
DNA (1035bp) protein (345aa)
hypothetical protein cdivTM_30108 id=1816724 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
GD18-4_B1_scaffold_1334202_29
R_RIF_OD1_03_52_15, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

24646..25095
DNA (450bp) protein (150aa)
hypothetical protein cdivTM_30108 id=1921027 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_52_15_curated
GD18-4_B1_scaffold_1334202_30
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

25235..25627
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003819AF3
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
Displaying items 1-30 of 53 in total

View Taxonomy