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GD18-4_B1_scaffold_1617662

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1617662_1
R_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

1..144
DNA (144bp) protein (48aa)
hypothetical protein id=5801328 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFCSPHIGHO2_01_FULL_OD1_47_10b_curated
GD18-4_B1_scaffold_1617662_2
R_RIF_OD1_03_52_15, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

307..876
DNA (570bp) protein (190aa)
LexA repressor id=2067988 bin=GWD2_Nitrospirae-related_57_8 species=uncultured bacterium W4-21b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
DNA polymerase V subunit
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_52_15_curated
GD18-4_B1_scaffold_1617662_3
GWC1_OD1_50_9, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

888..1199
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CM29_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW19800.1}; TaxID=1618608 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWC1_50_9.;"
hypothetical protein
GD18-4_B1_scaffold_1617662_4
RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1253..1576
DNA (324bp) protein (108aa)
transcriptional regulator, XRE family id=120727 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
XRE family transcriptional regulator
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated
GD18-4_B1_scaffold_1617662_5
R_RIF_OD1_03_53_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

1627..2910
DNA (1284bp) protein (428aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] id=5091490 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
nucleotidyltransferase/DNA polymerase protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_53_11_curated
GD18-4_B1_scaffold_1617662_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3090..3704
DNA (615bp) protein (205aa)
Maf-like protein L288_20305 n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GF53_9SPHN
Maf-like protein BV96_01125 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
maf protein
GD18-4_B1_scaffold_1617662_7
R_OD1_Yanofskybacteria_50_12, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3787..4335
DNA (549bp) protein (183aa)
id=2193018 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_50_12_curated
GD18-4_B1_scaffold_1617662_8
unknown

Not on your lists

comp(4428..4634)
DNA (207bp) protein (69aa)

This feature has no annotations

GD18-4_B1_scaffold_1617662_9
unknown

Not on your lists

comp(4930..7344)
DNA (2415bp) protein (805aa)

This feature has no annotations

GD18-4_B1_scaffold_1617662_10
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

7461..8366
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FE60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS56739.1}; TaxID=1619039 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
hypothetical protein
GD18-4_B1_scaffold_1617662_11

Not on your lists

8417..9913
DNA (1497bp) protein (499aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
purA; adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=uncultured bacterium RepID=K2E0I8_9BACT
GD18-4_B1_scaffold_1617662_12
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9917..10447)
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family id=4759403 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glutamine amidotransferase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
GD18-4_B1_scaffold_1617662_13
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

10527..11288
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IK31_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
GD18-4_B1_scaffold_1617662_14
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

11242..12147
DNA (906bp) protein (302aa)
seg 276..287 id=120259 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
GD18-4_B1_scaffold_1617662_15
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

12144..13031
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RE01_METP4
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
GD18-4_B1_scaffold_1617662_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13132..14277
DNA (1146bp) protein (382aa)
hypothetical protein id=14424845 bin=bin1_lowGC species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
GD18-4_B1_scaffold_1617662_17
RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14313..16745)
DNA (2433bp) protein (811aa)
Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated
GD18-4_B1_scaffold_1617662_18
GWA2_OD1_46_10_curated, Parcubacteria, Bacteria

Not on your lists

16885..17586
DNA (702bp) protein (234aa)
graD_6; sugar nucleotidyltransferase (glucose-1-phosphate thymidylyltransferase) 6 (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=138669 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
Tax=GWA2_OD1_46_10_curated
GD18-4_B1_scaffold_1617662_19
unknown

Not on your lists

comp(17644..17790)
DNA (147bp) protein (49aa)

This feature has no annotations

GD18-4_B1_scaffold_1617662_20
unknown

Not on your lists

comp(17787..17978)
DNA (192bp) protein (64aa)

This feature has no annotations

GD18-4_B1_scaffold_1617662_21
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18235..19404)
DNA (1170bp) protein (390aa)
Putative integral membrane protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6S9_METCZ
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:AFC99399.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
GD18-4_B1_scaffold_1617662_22
R_OP11_Woesebacteria_41_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

19587..20357
DNA (771bp) protein (257aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_41_10_curated
GD18-4_B1_scaffold_1617662_23
unknown

Not on your lists

20496..22103
DNA (1608bp) protein (536aa)

This feature has no annotations

GD18-4_B1_scaffold_1617662_24
GWB1_OD1_42_17, Azambacteria, Parcubacteria, Bacteria

Not on your lists

22452..23546
DNA (1095bp) protein (365aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKS44197.1}; TaxID=1618615 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_42_17.;"
S-adenosylmethionine synthase id=2329578 bin=GWD1_TM7_39_7 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
GD18-4_B1_scaffold_1617662_25
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

23555..24025
DNA (471bp) protein (157aa)
tRNA/rRNA methyltransferase SpoU id=15189825 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tRNA/rRNA methyltransferase SpoU
Tax=CG_CPR14_01
GD18-4_B1_scaffold_1617662_26
unknown

Not on your lists

24038..24283
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 26 items

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