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GOSHIP-P18_170_1_13_153S_1017m_2_16458

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_16458_1
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..216
-----------------
DNA (216bp)
protein (72aa)
rpmD; 50S ribosomal protein L30
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036ABEA6
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
GOSHIP-P18_170_1_13_153S_1017m_2_16458_2
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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249..758
-----------------
DNA (510bp)
protein (170aa)
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4A2E3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_16458_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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791..2134
-----------------
DNA (1344bp)
protein (448aa)
secY; preprotein translocase secY subunit
preprotein translocase subunit SecY n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B40CFF
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_16458_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2131..2790
-----------------
DNA (660bp)
protein (220aa)
adenylate kinase
Adenylate kinase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YW18_9PROT
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
GOSHIP-P18_170_1_13_153S_1017m_2_16458_5
unknown

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2997..3176
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_16458_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3169..3561
-----------------
DNA (393bp)
protein (131aa)
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNV9_TISMK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
GOSHIP-P18_170_1_13_153S_1017m_2_16458_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3669..4685
-----------------
DNA (1017bp)
protein (339aa)
rpoA; DNA-directed RNA polymerase alpha chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ADR2_9PROT
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_16458_8
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4714..4992
-----------------
DNA (279bp)
protein (93aa)
50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Novispirillum itersonii RepID=UPI00036D3FD6
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
Displaying 8 items

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