ggKbase home page

GOSHIP-P18_170_1_13_153S_1017m_2_16458_7

Organism: GOSHIP-P18_170_1_13_153S_1017m_2_Alphaproteobacteria_48_9

near complete RP 43 / 55 BSCG 47 / 51 ASCG 7 / 38 MC: 1
Location: 3669..4685

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha chain (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 338.0
  • Bit_score: 523
  • Evalue 4.10e-146
DNA-directed RNA polymerase subunit alpha n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ADR2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 338.0
  • Bit_score: 521
  • Evalue 4.20e-145
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 338.0
  • Bit_score: 526
  • Evalue 2.40e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATTCAGAAAAACTGGCAAGAACTTATAAAACCGACCAAGCTAGAGGTGCAGACAGATCAGTCTGCATTACGGACTGGGACGGTTGTGGCGGAACCACTTGAACGTGGCTTTGGACTTACACTTGGCAATGCATTGCGCAGGGTTTTGTTGTCAAGCCTTCGTGGTTCTGCAATTACGAGCTTAAGGATTGATGGCGTCCTTCACGAATTCTCCTCAATACCGGGAGTGCGTGAGGATGTAACAGAAGTGGTGTTAAATCTTAAAGCAATAGCGCTCCGTATGCACGGTGAAGGCCCAAAACGTGTTTCTTTGAGAGCTAGTGGCCCGGGACAAGCAACTGCTGGTCAGATTGATACTGGGCACGATATTGAGATTATGGACTCCGATCTTGTTATCTGTACTCTAGATAAAGACGCATCGATCAATTTTGAACTAACGGTAGAGAGTGGAAAAGGTTATGTGCCGGCGATGCAAAACAAGCCAGACGATGCTCCAATAGGATTGGTTCCGATTGATGCGGTCTTCAGCCCGGTACGCCAGGTGAGCTATAAAGTTGATCACACTCGTGTCGGACAGGTTACAGACTACGATAAATTAACACTAAATGTAGAGACGGATGGGACGGTGACACCCGAAGACTCTGTGGCGTTGGCTGCTCGTATTTTAACCGACCAACTGCAACTTTTTATCAACTTTGACGAGCCAACCCGAGAACCTGGCGTCGAAGTCGCTGAGGAACCAGCTTTTAATGCTAACTTGCTGCGTAAGGTTGATGAGTTGGAACTGTCGGTTCGTTCAGCAAACTGCTTAAAGAATGACAATATTGTTTACATAGGGGATCTCGTTCAAAAGACAGAAGGCGACATGTTAAGAACTCCTAATTTCGGCAGGAAATCCCTAAACGAAATAAGGGAAGTACTTGGACACATGAATCTGCAGTTGGGAATGCATATTGAGGATTGGCCTCCAGAAAATATTGAGGAAATGGCCAAGCGGCTCGAGGAACCTTTTTAG
PROTEIN sequence
Length: 339
VIQKNWQELIKPTKLEVQTDQSALRTGTVVAEPLERGFGLTLGNALRRVLLSSLRGSAITSLRIDGVLHEFSSIPGVREDVTEVVLNLKAIALRMHGEGPKRVSLRASGPGQATAGQIDTGHDIEIMDSDLVICTLDKDASINFELTVESGKGYVPAMQNKPDDAPIGLVPIDAVFSPVRQVSYKVDHTRVGQVTDYDKLTLNVETDGTVTPEDSVALAARILTDQLQLFINFDEPTREPGVEVAEEPAFNANLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEGDMLRTPNFGRKSLNEIREVLGHMNLQLGMHIEDWPPENIEEMAKRLEEPF*