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GOSHIP-P18_170_1_13_153S_1017m_2_1091

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_1091_1
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..231)
-----------------
DNA (231bp)
protein (77aa)
peptide deformylase
Peptide deformylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GKC6_9PROT
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_2
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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318..1460
-----------------
DNA (1143bp)
protein (381aa)
D-3-phosphoglycerate dehydrogenase (PGDH) (EC:1.1.1.95)
Putative D-3-phosphoglycerate dehydrogenase (PGDH) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SF76_9BRAD
Putative D-3-phosphoglycerate dehydrogenase (PGDH) {ECO:0000313|EMBL:CCD92853.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CCD92853.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_3
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1513..2277
-----------------
DNA (765bp)
protein (255aa)
putative DnaJ-like protein DjlA
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035D0D2E
Putative DnaJ-like protein DjlA {ECO:0000313|EMBL:CCQ72823.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_4
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2339..4162
-----------------
DNA (1824bp)
protein (608aa)
ABC transporter, ATP-binding protein with duplicated ATPase domains
elongation factor 3 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B554EB
ABC transporter {ECO:0000313|EMBL:EKF09512.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_5
unknown

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4820..4948
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_1091_6
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5135..5620
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein
Protein MraZ n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FMR3_PHAMO
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1091_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5617..6597
-----------------
DNA (981bp)
protein (327aa)
mraW; S-adenosyl-methyltransferase
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNF3_9PROT
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6594..6908
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein
Periplasmic protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVS0_TISMK
Periplasmic protein {ECO:0000313|EMBL:AFK56858.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_9
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6966..8579
-----------------
DNA (1614bp)
protein (538aa)
ftsZ; cell division protein FtsZ, GTP binding domain
Cell division protein FtsZ n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVQ7_TISMK
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_10
RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8585..10345
-----------------
DNA (1761bp)
protein (587aa)
cell division protein FtsI/penicillin-binding protein 2
Peptidoglycan synthetase FtsI n=1 Tax=Oceanibaculum indicum P24 RepID=K2KF61_9PROT
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1091_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10365..11816
-----------------
DNA (1452bp)
protein (484aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003669F73
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1091_12
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11816..13045
-----------------
DNA (1230bp)
protein (410aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFM0_AZOBR
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
Displaying 12 items

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