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GOSHIP-P18_170_1_13_153S_1017m_2_1384

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_1384_1
RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..198
-----------------
DNA (198bp)
protein (66aa)
nitrile hydratase beta subunit protein
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000288C857
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1384_2
RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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195..482
-----------------
DNA (288bp)
protein (96aa)
putative ScnA-like protein
Putative ScnA-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN5_RUBXD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1384_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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491..1114
-----------------
DNA (624bp)
protein (208aa)
nitrile hydratase alpha subunit protein
Nitrile hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7C5_9GAMM
Nitrile hydratase {ECO:0000313|EMBL:EIL95366.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1176..1634)
-----------------
DNA (459bp)
protein (153aa)
putative MaoC-like dehydratase
Putative MaoC-like dehydratase id=3021547 bin=GWF2_Methylomirabilis_70_14 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1384_5
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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comp(1665..2369)
-----------------
DNA (705bp)
protein (235aa)
ABC transporter
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EY44_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15708715}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_6
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2366..3190)
-----------------
DNA (825bp)
protein (275aa)
livG3; high-affinity branched-chain amino acid transport ATP-binding protein LivG
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003740008
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT02247.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3177..4139)
-----------------
DNA (963bp)
protein (321aa)
livM; branched-chain amino acid ABC transporter system, permease protein
PREDICTED: high-affinity branched-chain amino acid transport system permease protein BraE-like n=1 Tax=Amphimedon queenslandica RepID=UPI00021A6087
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KGB82415.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_8
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4148..5023)
-----------------
DNA (876bp)
protein (292aa)
amino acid ABC transporter
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037FF871
ABC transporter permease {ECO:0000313|EMBL:KGB82414.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_9
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5041..6216)
-----------------
DNA (1176bp)
protein (392aa)
amino acid ABC transporter substrate-binding protein
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003720C2F
ABC transporter {ECO:0000313|EMBL:KGB82413.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6387..6797
-----------------
DNA (411bp)
protein (137aa)
thioesterase
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037EC641
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1384_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6834..7544)
-----------------
DNA (711bp)
protein (237aa)
putative fumarylacetoacetate hydrolase
Putative fumarylacetoacetate hydrolase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGC0_AZOBR
Putative fumarylacetoacetate hydrolase {ECO:0000313|EMBL:CCC96655.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_12
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7541..8596)
-----------------
DNA (1056bp)
protein (352aa)
gentisate 1,2-dioxygenase
Putative gentisate 1,2-dioxygenase with a Cupin, RmlC-type domain n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T9F6_9BRAD
Putative gentisate 1,2-dioxygenase with a Cupin, RmlC-type domain {ECO:0000313|EMBL:CCE03083.1}; EC=1.13.11.4 {ECO:0000313|EMBL:CCE03083.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1384_13
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8750..9781
-----------------
DNA (1032bp)
protein (344aa)
ndoR; oxidoreductase FAD-binding subunit
Oxidoreductase FAD-binding subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU0_TISMK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1384_14
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9781..10713
-----------------
DNA (933bp)
protein (311aa)
dehydrogenase
Putative short-chain type dehydrogenase/reductase n=1 Tax=Bacillus isronensis B3W22 RepID=K1KP42_9BACI
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1384_15
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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10723..11424
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATG7_STRRD
1,2-phenylacetyl-CoA epoxidase, subunit A {ECO:0000313|EMBL:GAK33798.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
Displaying 15 items

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