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GOSHIP-P18_170_1_13_153S_1017m_2_1638

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_1638_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1134
-----------------
DNA (1134bp)
protein (378aa)
chaperone protein DnaJ
Chaperone protein DnaJ n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RJ19_9RHIZ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1190..2002
-----------------
DNA (813bp)
protein (271aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=uncultured Aminicenantes bacterium RepID=Q2YZX9_9BACT
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2134..2622)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6ABDC
Membrane protein {ECO:0000313|EMBL:EWY40511.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2780..3421
-----------------
DNA (642bp)
protein (214aa)
endonuclease III
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D6E0B4
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3552..4535
-----------------
DNA (984bp)
protein (328aa)
sugar kinase
carbohydrate kinase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3A751
Carbohydrate kinase {ECO:0000313|EMBL:EWY40607.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_6
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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4651..5880
-----------------
DNA (1230bp)
protein (410aa)
major facilitator superfamily permease
Putative permease, major facilitator superfamily n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T4E0_META2
Putative permease, major facilitator superfamily {ECO:0000313|EMBL:CCE24951.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_7
RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated, Omnitrophica, Bacteria

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comp(5859..6473)
-----------------
DNA (615bp)
protein (205aa)
type 12 methyltransferase
Methyltransferase type 12 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSR2_PARL1
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1638_8
unknown

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7148..7303
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_1638_9
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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7310..8668
-----------------
DNA (1359bp)
protein (453aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003742106
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1638_10
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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8665..9195
-----------------
DNA (531bp)
protein (177aa)
chromate transport protein
Chromate transport protein n=2 Tax=Legionella longbeachae RepID=D1RIE7_LEGLO
Putative chromate transport protein {ECO:0000313|EMBL:CBJ10792.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
GOSHIP-P18_170_1_13_153S_1017m_2_1638_11
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9210..10421)
-----------------
DNA (1212bp)
protein (404aa)
phosphate permease
Phosphate transporter n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYR5_MARPU
Phosphate permease {ECO:0000313|EMBL:AHF02777.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Displaying 11 items

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