ggKbase home page

GOSHIP-P18_170_1_13_153S_1017m_2_2386

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_2386_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..690
-----------------
DNA (690bp)
protein (230aa)
ATP-dependent helicase MgpS
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI00037394F3
Helicase-like protein {ECO:0000313|EMBL:EDP66871.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

687..1103
-----------------
DNA (417bp)
protein (139aa)
putative Heat shock protein
Putative Heat shock protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z234_AZOL4
Putative Heat shock protein {ECO:0000313|EMBL:CBS85437.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1121..2407)
-----------------
DNA (1287bp)
protein (429aa)
gatA1; amidase (EC:6.3.5.-)
Amidase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUQ7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
GOSHIP-P18_170_1_13_153S_1017m_2_2386_4
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2420..3691)
-----------------
DNA (1272bp)
protein (424aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXC9_RHOCS
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_5
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3842..5344
-----------------
DNA (1503bp)
protein (501aa)
exonuclease VII large subunit
Exodeoxyribonuclease 7 large subunit n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AGM0_9PROT
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5344..6168
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein
Peptidase M23 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUH5_9PROT
Peptidase M23 {ECO:0000313|EMBL:EKE68865.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_7
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6180..7082)
-----------------
DNA (903bp)
protein (301aa)
lauroyl/myristoyl acyltransferase
Lauroyl/myristoyl acyltransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VZS7_MAGSA
Lauroyl/myristoyl acyltransferase {ECO:0000313|EMBL:BAE52898.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7089..8057)
-----------------
DNA (969bp)
protein (323aa)
lpxK; tetraacyldisaccharide 4'-kinase
Tetraacyldisaccharide 4'-kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J209_9PROT
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2386_9
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8061..8516)
-----------------
DNA (456bp)
protein (152aa)
waaA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.4.-.-)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Acetobacter sp. CAG:977 RepID=R5QID3_9PROT
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CCZ21996.1}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
Displaying 9 items

View Taxonomy