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GOSHIP-P18_170_1_13_153S_1017m_2_263

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_263_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1..774
-----------------
DNA (774bp)
protein (258aa)
fatty acid desaturase
Fatty acid desaturase family protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGQ2_METPP
Uncharacterized protein {ECO:0000313|EMBL:ETW99921.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_2
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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841..1287
-----------------
DNA (447bp)
protein (149aa)
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UFF5_9CYAN
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EGK88805.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1293..2792)
-----------------
DNA (1500bp)
protein (500aa)
putative carboxypeptidase (EC:3.4.17.19)
Carboxypeptidase Taq n=1 Tax=Oceanibaculum indicum P24 RepID=K2JKF1_9PROT
Carboxypeptidase Taq {ECO:0000313|EMBL:EKE75803.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2801..3724)
-----------------
DNA (924bp)
protein (308aa)
ctaA; cytochrome C oxidase assembly protein, AA3 subunit-controlling protein
Cytochrome C oxidase assembly protein, AA3 subunit-controlling protein n=1 Tax=Tistrella mobilis (strain KA081020-065) PF6_TISMK">RepID=I3TPF6_TISMK
Cytochrome C oxidase assembly protein, AA3 subunit-controlling protein {ECO:0000313|EMBL:AFK54644.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3721..4458)
-----------------
DNA (738bp)
protein (246aa)
SURF1 family protein
SURF1 family protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MER9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM34974.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_6
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4461..4844)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B735E2
Uncharacterized protein {ECO:0000313|EMBL:KEO59561.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4865..5689)
-----------------
DNA (825bp)
protein (275aa)
cytochrome c oxidase subunit III
cytochrome B562 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5FB4A
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:ABS69863.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5747..6334)
-----------------
DNA (588bp)
protein (196aa)
ctaG; cytochrome c oxidase assembly protein CtaG
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXF9_RHOCS
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_9
unknown

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comp(6331..6459)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_263_10
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6470..7396)
-----------------
DNA (927bp)
protein (309aa)
ctaB; putative protoheme IX farnesyltransferase (heme o synthase)
Protoheme IX farnesyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPG2_TISMK
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_11
Candidatus Pelagibacter sp. IMCC9063, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7421..9028)
-----------------
DNA (1608bp)
protein (536aa)
cytochrome c oxidase polypeptide I (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Pelagibacter ubique RepID=UPI00013BC1A2
Cytochrome c oxidase polypeptide I {ECO:0000313|EMBL:AEA81145.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEA81145.1};; TaxID=1002672 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae; Candidatus Pelagibacter.;" source="Pelagibacter sp. (strain IMCC9063).;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_12
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9041..9913)
-----------------
DNA (873bp)
protein (291aa)
cytochrome c oxidase polypeptide II (EC:1.9.3.1)
cytochrome C oxidase subunit II n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5FDD2
Cytochrome c oxidase subunit 2; EC=1.9.3.1 {ECO:0000313|EMBL:CDO60425.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_13
unknown

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comp(9971..10192)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_263_14
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10182..10991)
-----------------
DNA (810bp)
protein (270aa)
enoyl-CoA hydratase/isomerase family protein
crotonase n=1 Tax=Burkholderia bryophila RepID=UPI00035FC6B2
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AJZ60829.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10988..12553)
-----------------
DNA (1566bp)
protein (522aa)
AMP-dependent ligase
4-chlorobenzoate--CoA ligase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUH8_9BURK
4-chlorobenzoate--CoA ligase {ECO:0000313|EMBL:KJB91033.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_16
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12546..13058)
-----------------
DNA (513bp)
protein (171aa)
oxidoreductase, iron-sulfur binding subunit
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037C2B9A
Oxidoreductase, iron-sulfur subunit {ECO:0000313|EMBL:AFT71115.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13046..13876)
-----------------
DNA (831bp)
protein (277aa)
h16_A1702; FAD binding domain-containing protein (EC:1.1.1.-)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCS0_9BURK
Tax=RBG_16_Betaproteobacteria_64_18_curated
GOSHIP-P18_170_1_13_153S_1017m_2_263_18
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13873..16302)
-----------------
DNA (2430bp)
protein (810aa)
carbon-monoxide dehydrogenase, large subunit (EC:1.2.99.2)
Carbon monoxide dehydrogenase n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DSU9_PSEFL
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KFE50576.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_19
RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated, Rokubacteria, Bacteria

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comp(16316..17290)
-----------------
DNA (975bp)
protein (325aa)
luciferase family protein
luciferase family protein id=14625861 bin=bin7_NC10_sister species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GOSHIP-P18_170_1_13_153S_1017m_2_263_20
unknown

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comp(17301..17783)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_263_21
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17871..19310
-----------------
DNA (1440bp)
protein (480aa)
tldD; peptidase TldD
TldD protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMX9_9PROT
Protease TldD {ECO:0000313|EMBL:KGM34979.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_22
RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19341..20228)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BTW7_PUNMI
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
GOSHIP-P18_170_1_13_153S_1017m_2_263_23
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20329..21687)
-----------------
DNA (1359bp)
protein (453aa)
glutamate--cysteine ligase
Gamma-glutamylcysteine synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZN2_9PROT
Gamma-glutamylcysteine synthetase {ECO:0000313|EMBL:EKE75824.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21783..22532)
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein
Ribosomal RNA small subunit methyltransferase E n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVH0_9PROT
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_25
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22671..23516
-----------------
DNA (846bp)
protein (282aa)
4-hydroxybenzoate polyprenyltransferase
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZ05_RHOVT
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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23600..25105
-----------------
DNA (1506bp)
protein (502aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
3-octaprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9E6_AZOL4
3-polyprenyl-4-hydroxybenzoate decarboxylase {ECO:0000313|EMBL:KJB93404.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_263_27
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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25161..25922
-----------------
DNA (762bp)
protein (254aa)
putative peptidase, PmbA-like
Putative peptidase, PmbA-like n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2B9_AZOL4
Putative peptidase, PmbA-like {ECO:0000313|EMBL:CBS87557.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Displaying 27 items

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