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GOSHIP-P18_170_1_13_153S_1017m_2_282

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_282_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1580)
-----------------
DNA (1578bp)
protein (526aa)
putative aminopeptidase P
Putative aminopeptidase P n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFP6_AZOBR
Putative aminopeptidase P {ECO:0000313|EMBL:CCC99051.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CCC99051.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_2
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1634..2536)
-----------------
DNA (903bp)
protein (301aa)
ribosomal protein L11 methylase
Ribosomal protein L11 methyltransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9E5_MAGSA
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_3
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2602..3672
-----------------
DNA (1071bp)
protein (357aa)
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD n=1 Tax=Paenibacillus lactis 154 RepID=G4HH30_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KCZ49416.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_4
alpha proteobacterium RS24, Alphaproteobacteria, Proteobacteria, Bacteria

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3669..4904
-----------------
DNA (1236bp)
protein (412aa)
phytanoyl-CoA dioxygenase
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BBC7E
Putative isohexenylglutaconyl-CoA hydratase protein {ECO:0000313|EMBL:ERL46918.1}; EC=4.2.1.57 {ECO:0000313|EMBL:ERL46918.1};; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4955..7228)
-----------------
DNA (2274bp)
protein (758aa)
uvrD; DNA helicase II (EC:3.6.1.-)
DNA helicase II n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT87_9PROT
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_6
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7239..8006)
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HMQ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS10545.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8046..8834)
-----------------
DNA (789bp)
protein (263aa)
hpcH/HpaI aldolase/citrate lyase family protein
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00036E5EA8
HpcH/HpaI aldolase {ECO:0000313|EMBL:EDP67005.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8893..9348)
-----------------
DNA (456bp)
protein (152aa)
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JQ12_9PROT
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EKE77358.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9604..10380)
-----------------
DNA (777bp)
protein (259aa)
short-chain dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPU1_9PROT
Oxidoreductase/SDR, NADPH carbonyl reductase {ECO:0000313|EMBL:GAN77605.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_10
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10405..11556)
-----------------
DNA (1152bp)
protein (384aa)
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFF0_METS4
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACA14804.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_11
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11589..12785)
-----------------
DNA (1197bp)
protein (399aa)
yngJ; pimeloyl-CoA dehydrogenase, large subunit
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I123_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERS15096.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_12
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12835..13776)
-----------------
DNA (942bp)
protein (314aa)
UDP-glucose 4-epimerase (galE-2)
UDP-glucose 4-epimerase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D5Y9_BACAZ
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EKN63453.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13783..14919)
-----------------
DNA (1137bp)
protein (379aa)
Mandelate racemase/muconate lactonizing protein
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003774BF3
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EKF42173.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_14
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15240..16085
-----------------
DNA (846bp)
protein (282aa)
putative ATPase, AAA family
Putative ATPase, AAA family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AND9_AZOBR
ATPase AAA {ECO:0000313|EMBL:EWY37136.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_15
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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16163..17338
-----------------
DNA (1176bp)
protein (392aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AND3_AZOBR
Conserved protein {ECO:0000313|EMBL:GAK44755.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_16
RIFCSPLOWO2_12_FULL_PLX_64_10_curated, Bacteria

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17620..18267
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B67B69
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GOSHIP-P18_170_1_13_153S_1017m_2_282_17
RIFCSPLOWO2_12_FULL_PLX_64_10_curated, Bacteria

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18297..19334
-----------------
DNA (1038bp)
protein (346aa)
methyltransferase MtaA/CmuA
methyltransferase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3407F
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GOSHIP-P18_170_1_13_153S_1017m_2_282_18
RIFCSPLOWO2_12_FULL_PLX_64_10_curated, Bacteria

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19376..20125
-----------------
DNA (750bp)
protein (250aa)
methyltransferase cognate corrinoid protein
corrinoid methyltransferase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6F77B
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GOSHIP-P18_170_1_13_153S_1017m_2_282_19
unknown

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20112..20483
-----------------
DNA (372bp)
protein (124aa)
ferredoxin n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4514D
GOSHIP-P18_170_1_13_153S_1017m_2_282_20
RIFCSPLOWO2_12_FULL_PLX_64_10_curated, Bacteria

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20480..22147
-----------------
DNA (1668bp)
protein (556aa)
ferredoxin
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003738A85
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GOSHIP-P18_170_1_13_153S_1017m_2_282_21
RIFCSPLOWO2_12_FULL_PLX_64_10_curated, Bacteria

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22181..23200
-----------------
DNA (1020bp)
protein (340aa)
methionine synthase (EC:2.1.1.13)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BAD59
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GOSHIP-P18_170_1_13_153S_1017m_2_282_22
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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23207..23434
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NXS7_CHRVO
Uncharacterized protein {ECO:0000313|EMBL:KIA79250.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_23
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23438..24100)
-----------------
DNA (663bp)
protein (221aa)
O-methyltransferase family 3
O-methyltransferase family 3 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z2_NITHN
O-methyltransferase family 3 {ECO:0000313|EMBL:ADE14549.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
GOSHIP-P18_170_1_13_153S_1017m_2_282_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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24190..24474
-----------------
DNA (285bp)
protein (95aa)
dihydroxy-acid dehydratase
Dihydroxy-acid dehydratase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TN78_9RHIZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 24 items

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