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GOSHIP-P18_196_1_3_231S_4440m_2_1586

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_196_1_3_231S_4440m_2_1586_1
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(3..1400)
-----------------
DNA (1398bp)
protein (466aa)
FeS assembly protein SufB
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003636F6C
Tax=RBG_16_Chloroflexi_64_32_curated
GOSHIP-P18_196_1_3_231S_4440m_2_1586_2
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1742..2539
-----------------
DNA (798bp)
protein (266aa)
hydrolase TatD
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361FD05
Hydrolase TatD {ECO:0000313|EMBL:AJF07955.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2545..3546
-----------------
DNA (1002bp)
protein (334aa)
LysR family transcriptional regulator
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002DDF812
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:CBE67922.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3741..4331
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E7643
Tax=CSP1_2_Dadabacteria
GOSHIP-P18_196_1_3_231S_4440m_2_1586_5

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4417..5421
-----------------
DNA (1005bp)
protein (335aa)
aldo/keto reductase
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035DBDAB
Uncharacterized protein {ECO:0000313|EMBL:KKL05674.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_6
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5482..6414)
-----------------
DNA (933bp)
protein (311aa)
purine nucleosidase (EC:3.2.2.1)
Purine nucleosidase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XNR9_PARAH
Nucleoside hydrolase {ECO:0000313|EMBL:KJS08295.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_7
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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comp(6411..7385)
-----------------
DNA (975bp)
protein (325aa)
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QM10_DESB2
Tax=RBG_13_Chloroflexi_53_26_curated
GOSHIP-P18_196_1_3_231S_4440m_2_1586_8

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comp(7394..7774)
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S20700 {ECO:0000313|EMBL:GAG18934.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_9
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(7823..8515)
-----------------
DNA (693bp)
protein (231aa)
L-fuculose-phosphate aldolase (EC:4.1.2.17)
L-fuculose-phosphate aldolase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNK5_DESK7
Tax=RBG_13_Chloroflexi_50_10_curated
GOSHIP-P18_196_1_3_231S_4440m_2_1586_10
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(8660..10159)
-----------------
DNA (1500bp)
protein (500aa)
3-phosphoglycerate dehydrogenase
Carbohydrate kinase, FGGY n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U7P3_OCEP5
Tax=RBG_13_Chloroflexi_60_13_curated
GOSHIP-P18_196_1_3_231S_4440m_2_1586_11
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(10152..11117)
-----------------
DNA (966bp)
protein (322aa)
3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase serA2 n=2 Tax=Mycobacterium RepID=I2AJ00_9MYCO
Tax=RBG_13_Chloroflexi_52_14_curated
GOSHIP-P18_196_1_3_231S_4440m_2_1586_12
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(11185..12057)
-----------------
DNA (873bp)
protein (291aa)
squalene/phytoene synthase
Squalene/phytoene synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFP1_9BACT
Tax=RBG_16_Chloroflexi_64_32_curated
GOSHIP-P18_196_1_3_231S_4440m_2_1586_13
S_OP1_64_32, KB1, Bacteria

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comp(12118..12561)
-----------------
DNA (444bp)
protein (148aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
hypothetical protein, partial n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00035D6A66
Tax=S_OP1_64_32
GOSHIP-P18_196_1_3_231S_4440m_2_1586_14
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12551..14656)
-----------------
DNA (2106bp)
protein (702aa)
shc; Squalene--hopene cyclase (EC:5.4.99.17)
Squalene cyclase n=2 Tax=Geobacter sulfurreducens RepID=D7AG11_GEOSK
Squalene--hopene cyclase {ECO:0000313|EMBL:CEG58976.1}; EC=5.4.99.17 {ECO:0000313|EMBL:CEG58976.1};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(14653..15657)
-----------------
DNA (1005bp)
protein (335aa)
putative dihydroflavanol 4-reductase (EC:1.1.1.219)
Putative Dihydroflavanol 4-reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB59_9BACT
Putative Dihydroflavanol 4-reductase {ECO:0000313|EMBL:CBK40468.1}; EC=1.1.1.219 {ECO:0000313|EMBL:CBK40468.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
GOSHIP-P18_196_1_3_231S_4440m_2_1586_16
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15699..16127)
-----------------
DNA (429bp)
protein (143aa)
purine phosphorylase family protein 1
Purine phosphorylases family protein 1 n=2 Tax=Rhodospirillum rubrum RepID=G2TGG6_RHORU
Purine and other phosphorylases, family 1 {ECO:0000313|EMBL:ABC20866.1}; EC=3.2.2.9 {ECO:0000313|EMBL:ABC20866.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Displaying 16 items

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