ggKbase home page

SCGC_AAA011_G17_25

Alias: A11G17DRAFT_contig_24_0.25

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCGC_AAA011_G17_25_1

Not on your lists

1..3465
DNA (3465bp) protein (1155aa)
Putative phosphatase {ECO:0000313|EMBL:AIF24585.1}; TaxID=1456576 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote SAT1000_34_C08.;"
N-acetylmuramoyl-L-alanine amidase
SCGC_AAA011_G17_25_2
unknown

Not on your lists

3462..4256
DNA (795bp) protein (265aa)
hypothetical protein
SCGC_AAA011_G17_25_3
unknown

Not on your lists

comp(4258..4371)
DNA (114bp)
transferRNA
SCGC_AAA011_G17_25_4
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4418..4582)
DNA (165bp) protein (55aa)
ribosomal protein L37e Rpl37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Met
Ribosomal protein L37E
SCGC_AAA011_G17_25_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(4584..4808)
DNA (225bp) protein (75aa)
Like-Sm ribonucleoprotein core
snRNP Sm-like protein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Woesearchaeota_36_6_curated
Small nuclear ribonucleoprotein (snRNP) homolog
SCGC_AAA011_G17_25_6

Not on your lists

4930..5307
DNA (378bp) protein (126aa)
Small subunit ribosomal protein S8e {ECO:0000313|EMBL:KHO45267.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
30S ribosomal protein S8e
ribosomal protein S8.e
SCGC_AAA011_G17_25_7
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

comp(5311..6021)
DNA (711bp) protein (237aa)
hypothetical protein Tax=RBG_16_CPR_42_10_curated
hypothetical protein
conserved hypothetical integral membrane protein
SCGC_AAA011_G17_25_8
unknown

Not on your lists

6201..7121
DNA (921bp) protein (307aa)
Transcription initiation factor IIB
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU Tax=AR20
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB
SCGC_AAA011_G17_25_9
unknown

Not on your lists

7122..7499
DNA (378bp) protein (126aa)
hypothetical protein
SCGC_AAA011_G17_25_10
unknown

Not on your lists

comp(7496..8398)
DNA (903bp) protein (301aa)
RNAse Z
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH Tax=AR20
ribonuclease Z
SCGC_AAA011_G17_25_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8445..8936)
DNA (492bp) protein (164aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
hypothetical protein
hypothetical protein
SCGC_AAA011_G17_25_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8933..10087)
DNA (1155bp) protein (385aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
putative Zn peptidase
Predicted Zn peptidase
SCGC_AAA011_G17_25_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(10198..10950)
DNA (753bp) protein (251aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator TrmB
Predicted transcriptional regulators
SCGC_AAA011_G17_25_14
unknown

Not on your lists

11069..11308
DNA (240bp) protein (80aa)
hypothetical protein
SCGC_AAA011_G17_25_15

Not on your lists

11396..11932
DNA (537bp) protein (179aa)
tRNA-intron endonuclease
tRNA-intron endonuclease {ECO:0000313|EMBL:AJF62335.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
tRNA intron endonuclease
SCGC_AAA011_G17_25_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11987..12907
DNA (921bp) protein (307aa)
Putative uncharacterized protein Tax=CG_Woesearch_02
hypothetical protein
hypothetical protein
SCGC_AAA011_G17_25_17
unknown

Not on your lists

comp(12878..13633)
DNA (756bp) protein (252aa)
hypothetical protein
SCGC_AAA011_G17_25_18
Thermoproteus tenax, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

13747..13944
DNA (198bp) protein (66aa)
rps17e; 30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=768679 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteu
Ribosomal protein S17E
SCGC_AAA011_G17_25_19

Not on your lists

14055..14300
DNA (246bp) protein (82aa)
Nucleoid protein Alba {ECO:0000313|EMBL:AJF62077.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
DNA/RNA-binding protein Alba
Archaeal DNA-binding protein
SCGC_AAA011_G17_25_20
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

14366..16060
DNA (1695bp) protein (565aa)
sodium/hydrogen exchanger Tax=CG_Pacearch_04
Transporter, CPA2 family
Kef-type K+ transport system, predicted NAD-binding component
SCGC_AAA011_G17_25_21
unknown

Not on your lists

16105..16296
DNA (192bp) protein (64aa)
hypothetical protein
SCGC_AAA011_G17_25_22
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(16493..16903)
DNA (411bp) protein (137aa)
Histidine triad (HIT) protein {ECO:0000313|EMBL:KKU73690.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
histidine triad (HIT) protein
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
SCGC_AAA011_G17_25_23
R_OP11_Woesebacteria_44_14, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(16876..17523)
DNA (648bp) protein (216aa)
Haloacid dehalogenase domain protein hydrolase Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_14_curated
HAD family hydrolase
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
SCGC_AAA011_G17_25_24
unknown

Not on your lists

comp(17538..17610)
DNA (73bp)
transferRNA
SCGC_AAA011_G17_25_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17664..18371)
DNA (708bp) protein (236aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator, TrmB
Predicted transcriptional regulators
SCGC_AAA011_G17_25_26
unknown

Not on your lists

18458..19003
DNA (546bp) protein (182aa)
hypothetical protein
SCGC_AAA011_G17_25_27
unknown

Not on your lists

18996..19223
DNA (228bp) protein (76aa)
hypothetical protein
Displaying 27 items

View Taxonomy