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GWA2_DPX2_42_85_gwa2_scaffold_5639

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_DPX2_42_85_gwa2_scaffold_5639_1
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149..2566)
DNA (2418bp) protein (806aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SMR4_THEAH
hypF; transcriptional regulatory protein HypF; K04656 hydrogenase maturation protein HypF Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
(NiFe) hydrogenase maturation protein HypF
GWA2_DPX2_42_85_gwa2_scaffold_5639_2
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2720..2956
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
GWA2_DPX2_42_85_gwa2_scaffold_5639_3
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3074..4030)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5X0_GEOUR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_5639_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4201..4797)
DNA (597bp) protein (199aa)
Putative uncharacterized protein id=4554252 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
GWA2_DPX2_42_85_gwa2_scaffold_5639_5
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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5418..5882
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP id=4554254 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_5639_6
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5903..7222
DNA (1320bp) protein (440aa)
Transcription termination factor NusA id=4554255 bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
transcription elongation factor NusA
GWA2_DPX2_42_85_gwa2_scaffold_5639_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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7417..9732
DNA (2316bp) protein (772aa)
Translation initiation factor IF-2 id=4554256 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
infB; translation initiation factor IF-2
GWA2_DPX2_42_85_gwa2_scaffold_5639_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9794..10081
DNA (288bp) protein (96aa)
Uncharacterized protein id=4554257 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_5639_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10161..10508
DNA (348bp) protein (116aa)
Ribosome-binding factor A id=4554258 bin=GWC2_Deltaproteobacteria_42_51 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ribosome-binding factor A
GWA2_DPX2_42_85_gwa2_scaffold_5639_10
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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10498..11490
DNA (993bp) protein (331aa)
Phosphoesterase RecJ domain protein id=4554259 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
phosphoesterase
GWA2_DPX2_42_85_gwa2_scaffold_5639_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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11487..12389
DNA (903bp) protein (301aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
tRNA pseudouridine synthase B id=4554260 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
truB; tRNA pseudouridine 55 synthase
GWA2_DPX2_42_85_gwa2_scaffold_5639_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12573..12839
DNA (267bp) protein (89aa)
30S ribosomal protein S15 id=4554261 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
rpsO; 30S ribosomal protein S15
GWA2_DPX2_42_85_gwa2_scaffold_5639_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12940..15033
DNA (2094bp) protein (698aa)
pnp; polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Polyribonucleotide nucleotidyltransferase id=4554263 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
pnp; polyribonucleotide nucleotidyltransferase
GWA2_DPX2_42_85_gwa2_scaffold_5639_14
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15217..16476
DNA (1260bp) protein (420aa)
Zinc-dependent peptidase, M16 family id=4554265 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptidase M16 domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
peptidase M16 domain-containing protein
GWA2_DPX2_42_85_gwa2_scaffold_5639_15
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16479..17150
DNA (672bp) protein (224aa)
Winged-helix transcriptional response regulator id=4554267 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
two component signal transduction response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria
winged-helix transcriptional response regulator
GWA2_DPX2_42_85_gwa2_scaffold_5639_16
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17151..18224)
DNA (1074bp) protein (358aa)
Permease id=4554269 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
permease Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
permease
GWA2_DPX2_42_85_gwa2_scaffold_5639_17
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18221..19408)
DNA (1188bp) protein (396aa)
Permease YjgP/YjgQ family protein id=4554272 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
YjgP/YjgQ family permease Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
YjgP/YjgQ family permease
GWA2_DPX2_42_85_gwa2_scaffold_5639_18
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19515..20189
DNA (675bp) protein (225aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase id=4554276 bin=GWC2_Deltaproteobacteria_42_51 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
deoxyribose-phosphate aldolase Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
GWA2_DPX2_42_85_gwa2_scaffold_5639_19
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20261..20452
DNA (192bp) protein (64aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
drm; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase id=4554278 bin=GWC2_Deltaproteobacteria_42_51 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Displaying 19 items

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