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GWA2_DPX2_42_85_gwa2_scaffold_14161

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_DPX2_42_85_gwa2_scaffold_14161_1
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70..2703)
DNA (2634bp) protein (878aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI87_9BACT
GWA2_DPX2_42_85_gwa2_scaffold_14161_2
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2811..4805
DNA (1995bp) protein (665aa)
UvrABC system protein B id=4925457 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
uvrB; excinuclease ABC subunit B
GWA2_DPX2_42_85_gwa2_scaffold_14161_3
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4808..5782)
DNA (975bp) protein (325aa)
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Polyprenyl synthetase id=4925456 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
polyprenyl synthetase
GWA2_DPX2_42_85_gwa2_scaffold_14161_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6131..6970)
DNA (840bp) protein (280aa)
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit id=1871287 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
GWA2_DPX2_42_85_gwa2_scaffold_14161_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7220..7918)
DNA (699bp) protein (233aa)
Putative uncharacterized protein id=4925454 bin=GWC2_Deltaproteobacteria_42_51 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL23246.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
GWA2_DPX2_42_85_gwa2_scaffold_14161_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7918..9222)
DNA (1305bp) protein (435aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_Omnitr_03
Carboxyl-terminal protease id=4925453 bin=GWC2_Deltaproteobacteria_42_51 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptidase S41
GWA2_DPX2_42_85_gwa2_scaffold_14161_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9381..10151)
DNA (771bp) protein (257aa)
DNA repair protein; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
DNA repair protein RecO id=4925452 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
DNA repair protein
GWA2_DPX2_42_85_gwa2_scaffold_14161_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..11570)
DNA (1362bp) protein (454aa)
Mg/Co/Ni transporter id=4925451 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Mg/Co/Ni transporter; K06213 magnesium transporter Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Mg/Co/Ni transporter
GWA2_DPX2_42_85_gwa2_scaffold_14161_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11793..12626)
DNA (834bp) protein (278aa)
Universal stress protein family protein id=4925430 bin=GWC2_Deltaproteobacteria_42_51 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
universal stress protein family protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
universal stress protein family protein
GWA2_DPX2_42_85_gwa2_scaffold_14161_10
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12684..14960)
DNA (2277bp) protein (759aa)
chaperone activity ATPase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ATPases with chaperone activity, ATP-binding subunit id=4925428 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
chaperone activity ATPase
GWA2_DPX2_42_85_gwa2_scaffold_14161_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15032..15931)
DNA (900bp) protein (300aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=4925426 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Zn finger domain-containing DnaJ-class molecular chaperone
GWA2_DPX2_42_85_gwa2_scaffold_14161_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16021..17937)
DNA (1917bp) protein (639aa)
Chaperone protein DnaK id=4925424 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
GWA2_DPX2_42_85_gwa2_scaffold_14161_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18621..18827
DNA (207bp) protein (69aa)
50S ribosomal protein L31 id=4925422 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
rpmE; 50S ribosomal protein L31
GWA2_DPX2_42_85_gwa2_scaffold_14161_14
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18947..19636
DNA (690bp) protein (230aa)
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Thymidylate synthase ThyX id=4925420 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
thyX; FAD-dependent thymidylate synthase
GWA2_DPX2_42_85_gwa2_scaffold_14161_15
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19830..20909
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 id=4925418 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
peptide chain release factor 1
GWA2_DPX2_42_85_gwa2_scaffold_14161_16
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20912..22165
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4925416 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_14161_17
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22162..22869
DNA (708bp) protein (236aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase id=4925415 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_14161_18
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22936..23667)
DNA (732bp) protein (244aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase id=4925414 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_14161_19
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23987..26710)
DNA (2724bp) protein (908aa)
calcium-transporting ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
calcium-transporting ATPase (EC:3.6.3.8)
Probable calcium-transporting ATPase id=3232633 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
GWA2_DPX2_42_85_gwa2_scaffold_14161_20
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26793..27098)
DNA (306bp) protein (102aa)
Uncharacterized protein id=3219528 bin=GWC2_Deltaproteobacteria_42_51 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein; K09981 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_14161_21
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27198..27659)
DNA (462bp) protein (154aa)
Membrane protease subunit, stomatin/prohibitin id=3219535 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
Displaying 21 items

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