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GWA2_DPX2_42_85_gwa2_scaffold_19051

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_DPX2_42_85_gwa2_scaffold_19051_1
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1682)
DNA (1680bp) protein (560aa)
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Carbamoyl-phosphate synthase large chain id=4368722 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
carB; carbamyl-phosphate synthase, large subunit, glutamine-dependent
GWA2_DPX2_42_85_gwa2_scaffold_19051_2
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1675..2310)
DNA (636bp) protein (212aa)
id=4368723 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
id=4368723 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_19051_3
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2345..3523)
DNA (1179bp) protein (393aa)
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Carbamoyl-phosphate synthase small chain id=4368724 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
carA; carbamoyl phosphate synthase small subunit
GWA2_DPX2_42_85_gwa2_scaffold_19051_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3613..4260)
DNA (648bp) protein (216aa)
MscS Mechanosensitive ion channel id=4368725 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
mechanosensitive ion channel MscS Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
mechanosensitive ion channel MscS
GWA2_DPX2_42_85_gwa2_scaffold_19051_5
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4251..4658)
DNA (408bp) protein (136aa)
MscS Mechanosensitive ion channel id=4368726 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
mechanosensitive ion channel MscS Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
mechanosensitive ion channel MscS
GWA2_DPX2_42_85_gwa2_scaffold_19051_6
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..6013)
DNA (1341bp) protein (447aa)
purB; adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Adenylosuccinate lyase id=4368728 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
purB; adenylosuccinate lyase
GWA2_DPX2_42_85_gwa2_scaffold_19051_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6086..6778)
DNA (693bp) protein (231aa)
Zinc transporter ZupT id=4368730 bin=GWC2_Deltaproteobacteria_42_51 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
zinc transporter ZupT ; K07238 zinc transporter, ZIP family Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Zinc transporter ZupT
GWA2_DPX2_42_85_gwa2_scaffold_19051_trna_1
unknown

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comp(6874..6944)
DNA (71bp)
transferRNA
GWA2_DPX2_42_85_gwa2_scaffold_19051_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7020..8477)
DNA (1458bp) protein (486aa)
Putative Uncharacterized domain HDIG id=4368732 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_19051_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8698..10629)
DNA (1932bp) protein (644aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
TPR repeat-containing protein id=4368734 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
TPR domain-containing protein
GWA2_DPX2_42_85_gwa2_scaffold_19051_10
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10642..11454)
DNA (813bp) protein (271aa)
yqhM; lipoate-protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
lipM; octanoyltransferase LipM (EC:2.3.1.181)
YqhM id=4368736 bin=GWC2_Deltaproteobacteria_42_51 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_19051_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11464..12798)
DNA (1335bp) protein (445aa)
biotin carboxylase/acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Delt
Acetyl-CoA carboxylase, biotin carboxylase id=4368738 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
accC; acetyl-CoA carboxylase, biotin carboxylase component
GWA2_DPX2_42_85_gwa2_scaffold_19051_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12978..13250)
DNA (273bp) protein (91aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein id=4368740 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
pyruvate carboxylase subunit B
Displaying 13 items

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