ggKbase home page

GWA2_DPX2_42_85_gwa2_scaffold_10959

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_DPX2_42_85_gwa2_scaffold_10959_1
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..769
DNA (768bp) protein (256aa)
id=4550869 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
id=4550869 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_10959_2
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

766..1506
DNA (741bp) protein (247aa)
id=4550862 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
id=4550862 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_10959_3
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1689..3629
DNA (1941bp) protein (647aa)
cstA; carbon starvation protein A; K06200 carbon starvation protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Carbon starvation protein id=3664312 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cstA; carbon starvation protein CstA
GWA2_DPX2_42_85_gwa2_scaffold_10959_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3630..4082)
DNA (453bp) protein (151aa)
acpS; acyl carrier protein 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Holo-[acyl-carrier-protein] synthase id=3664314 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
acpS; acyl carrier protein 4'-phosphopantetheinyltransferase
GWA2_DPX2_42_85_gwa2_scaffold_10959_5
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4154..4867)
DNA (714bp) protein (238aa)
pdxJ; pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Pyridoxine 5'-phosphate synthase id=3664316 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
pyridoxine 5'-phosphate synthase
GWA2_DPX2_42_85_gwa2_scaffold_10959_6
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4960..6309)
DNA (1350bp) protein (450aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Phosphoglucosamine mutase id=3664318 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
glmM; phosphoglucosamine mutase
GWA2_DPX2_42_85_gwa2_scaffold_10959_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6339..6752)
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=3664320 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_10959_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..7698)
DNA (759bp) protein (253aa)
Diadenylate cyclase id=3664322 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
membrane protein
GWA2_DPX2_42_85_gwa2_scaffold_10959_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7761..8990)
DNA (1230bp) protein (410aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase id=3664324 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_10959_10
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9127..10968)
DNA (1842bp) protein (614aa)
ftsH-2; cell division ATP-dependent zinc protease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ATP-dependent zinc metalloprotease FtsH id=3664326 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ftsH-2; cell division ATP-dependent zinc protease FtsH
GWA2_DPX2_42_85_gwa2_scaffold_10959_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11100..12194)
DNA (1095bp) protein (365aa)
Uncharacterized protein-like protein id=3664328 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein; K09931 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_10959_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12689..13762)
DNA (1074bp) protein (358aa)
Transglutaminase domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4J7_GEOUR
transglutaminase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
transglutaminase domain-containing protein
GWA2_DPX2_42_85_gwa2_scaffold_10959_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13863..14753)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
LysR family transcriptional regulator id=14626582 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
LysR family transcriptional regulator
GWA2_DPX2_42_85_gwa2_scaffold_10959_14
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14808..15704)
DNA (897bp) protein (299aa)
xerD; tyrosine recombinase; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Tyrosine recombinase XerD id=2008915 bin=GWB2_Proteobacteria_55_19 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
xerD_2; tyrosine recombinase XerD
Displaying 14 items

View Taxonomy