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GWA2_DPX2_42_85_gwa2_scaffold_8461

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_DPX2_42_85_gwa2_scaffold_8461_1
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..680)
DNA (678bp) protein (226aa)
cdsA; protein CdsA (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Phosphatidate cytidylyltransferase id=4677524 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cdsA; phosphatidate cytidylyltransferase
GWA2_DPX2_42_85_gwa2_scaffold_8461_2
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(871..1623)
DNA (753bp) protein (251aa)
UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
UDP pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase id=4677525 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_8461_3
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1915..2352)
DNA (438bp) protein (146aa)
transcription antitermination factor NusB Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
N utilization substance protein B homolog id=4677526 bin=GWC2_Deltaproteobacteria_42_51 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
transcription antitermination factor NusB
GWA2_DPX2_42_85_gwa2_scaffold_8461_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2353..2829)
DNA (477bp) protein (159aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase id=4677527 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_8461_5
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2902..4155)
DNA (1254bp) protein (418aa)
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase id=4677528 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
3,4-dihydroxy-2-butanone 4-phosphate synthase
GWA2_DPX2_42_85_gwa2_scaffold_8461_6
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4523..5167)
DNA (645bp) protein (215aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit id=4677556 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWA2_DPX2_42_85_gwa2_scaffold_8461_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5239..6354)
DNA (1116bp) protein (372aa)
bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deamina
Riboflavin biosynthesis protein RibD id=4677557 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ribD; 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil reductase
GWA2_DPX2_42_85_gwa2_scaffold_8461_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6351..6818)
DNA (468bp) protein (156aa)
transcriptional regulator NrdR Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
nrdR; NrdR family transcriptional regulator; K07738 transcriptional repressor NrdR id=15194140 bin=GWC2_NOV_55_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
transcriptional regulator NrdR
GWA2_DPX2_42_85_gwa2_scaffold_8461_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7337..8122
DNA (786bp) protein (262aa)
id=4677559 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
id=4677559 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
GWA2_DPX2_42_85_gwa2_scaffold_8461_10
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8382..9674
DNA (1293bp) protein (431aa)
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Histidinol dehydrogenase id=4677560 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase
GWA2_DPX2_42_85_gwa2_scaffold_8461_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9756..10241)
DNA (486bp) protein (162aa)
Uncharacterized protein id=4677561 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
GWA2_DPX2_42_85_gwa2_scaffold_8461_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10436..11206
DNA (771bp) protein (257aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Enoyl-[acyl-carrier-protein] reductase [NADH] id=4677562 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
GWA2_DPX2_42_85_gwa2_scaffold_8461_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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11236..11739
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=4677563 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
GWA2_DPX2_42_85_gwa2_scaffold_8461_14
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11762..11944
DNA (183bp) protein (61aa)
Ribonuclease R id=4677564 bin=GWC2_Deltaproteobacteria_42_51 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Ribonuclease R Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
GWA2_DPX2_42_85_gwa2_scaffold_8461_15
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11948..13945
DNA (1998bp) protein (666aa)
rnr; exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Ribonuclease R id=4677565 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ribonuclease R
GWA2_DPX2_42_85_gwa2_scaffold_8461_16
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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14008..15696
DNA (1689bp) protein (563aa)
ABC-1 domain protein id=4677566 bin=GWC2_Deltaproteobacteria_42_51 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ABC transporter; K03688 ubiquinone biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ubiquinone biosynthesis protein UbiB
Displaying 16 items

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