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GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(3..1259)
DNA (1257bp) protein (419aa)
Uncharacterized protein id=2097975 bin=GWB2_Ignavibacteria_35_12 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
protein of unknown function DUF262 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
protein of unknown function DUF262
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(1424..2905)
DNA (1482bp) protein (494aa)
Uncharacterized protein id=2097977 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

3144..4748
DNA (1605bp) protein (535aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) id=2097979 bin=GWB2_Ignavibacteria_35_12 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

4738..4866
DNA (129bp) protein (43aa)
hypothetical protein id=2097981 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

4908..5024
DNA (117bp) protein (39aa)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

5014..6162
DNA (1149bp) protein (383aa)
Putative uncharacterized protein id=2098033 bin=GWB2_Ignavibacteria_35_12 species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

6330..8081
DNA (1752bp) protein (584aa)
n-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative uncharacterized protein id=2098034 bin=GWB2_Ignavibacteria_35_12 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
n-6 DNA methylase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

8081..9832
DNA (1752bp) protein (584aa)
putative transcriptional regulator with HTH domain Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative uncharacterized protein id=2098035 bin=GWB2_Ignavibacteria_35_12 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
putative transcriptional regulator with HTH domain
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

9944..11239
DNA (1296bp) protein (432aa)
hypothetical protein id=2098037 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11244..12617
DNA (1374bp) protein (458aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Restriction modification system DNA specificity domain protein id=4791468 bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

12797..14464
DNA (1668bp) protein (556aa)
transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative transcriptional regulator id=2098042 bin=GWB2_Ignavibacteria_35_12 species=Nitratifractor salsuginis genus=Nitratifractor taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
transcriptional regulator
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

14805..17798
DNA (2994bp) protein (998aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Restriction endonuclease, type I, EcoRI, R subunit/Type III id=2098044 bin=GWB2_Ignavibacteria_35_12 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
type III restriction protein res subunit
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_trna_2
unknown

Not on your lists

comp(18087..18160)
DNA (74bp)
transferRNA
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(18166..18432)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 id=4791471 bin=GWA2_Ignavibacteria-rel_35_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
30S ribosomal protein S20
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18540..19073)
DNA (534bp) protein (178aa)
hypothetical protein id=2098051 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(19110..20870)
DNA (1761bp) protein (587aa)
NHL repeat containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
PKD domain containing protein id=4791473 bin=GWA2_Ignavibacteria-rel_35_8 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
PKD domain-containing protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

22399..23463
DNA (1065bp) protein (355aa)
rluD; Ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Pseudouridine synthase id=2098058 bin=GWB2_Ignavibacteria_35_12 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rluD; ribosomal large subunit pseudouridine synthase D
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

23460..24062
DNA (603bp) protein (201aa)
Uncharacterized protein id=2098060 bin=GWB2_Ignavibacteria_35_12 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
nitroreductase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
nitroreductase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(24115..26661)
DNA (2547bp) protein (849aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Alanine--tRNA ligase id=2098063 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
alaS; alanyl-tRNA synthetase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(26802..28172)
DNA (1371bp) protein (457aa)
tnaA; tryptophanase; K01667 tryptophanase [EC:4.1.99.1] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Tryptophanase id=2098066 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
tnaA; tryptophanase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_trna_1
unknown

Not on your lists

28365..28435
DNA (71bp)
transferRNA
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

28473..29036
DNA (564bp) protein (188aa)
Elongation factor P id=2098069 bin=GWB2_Ignavibacteria_35_12 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
translation elongation factor P Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
translation elongation factor P
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

29091..29615
DNA (525bp) protein (175aa)
Biotin carboxyl carrier protein id=2098072 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
accB; Biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
accB; Biotin carboxyl carrier protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_5869_22
unknown

Not on your lists

29644..29703
DNA (60bp) protein (20aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein id=1732535 bin=GWB2_Ignavibacteria_35_12 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Outer membrane protein/peptidoglycan-associated (Lipo)protein id=1732535 bin=GWB2_Ignavibacteria_35_12 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
OmpA/MotB domain-containing protein
Displaying 24 items

View Taxonomy