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GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1..219
DNA (219bp) protein (73aa)
homoaconitate hydratase family protein; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=4853641 bin=GWA2_Ignavibacteria-rel_35_8 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

221..718
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit id=2195350 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
3-isopropylmalate dehydratase, small subunit Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
3-isopropylmalate dehydratase, small subunit
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

799..993
DNA (195bp) protein (65aa)
hypothetical protein id=4853643 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1033..1311
DNA (279bp) protein (93aa)
Transcriptional regulator, XRE family id=2195346 bin=GWB2_Ignavibacteria_35_12 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
XRE family transcriptional regulator Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
XRE family transcriptional regulator
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1398..1625
DNA (228bp) protein (76aa)
hypothetical protein id=2195344 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1622..1807
DNA (186bp) protein (62aa)
hypothetical protein id=2195342 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1904..2422
DNA (519bp) protein (173aa)
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Orotate phosphoribosyltransferase id=2195340 bin=GWB2_Ignavibacteria_35_12 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
pyrE; orotate phosphoribosyltransferase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(2747..3769)
DNA (1023bp) protein (341aa)
hypothetical protein id=2195338 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

3932..4174
DNA (243bp) protein (81aa)
Nitrogen-fixing NifU domain-containing protein id=2195336 bin=GWB2_Ignavibacteria_35_12 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
nifU; NifU domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
nifU; NifU domain-containing protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(4585..6756)
DNA (2172bp) protein (724aa)
hypothetical protein id=2195334 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7013..7438)
DNA (426bp) protein (142aa)
Membrane protein-like protein id=2195331 bin=GWB2_Ignavibacteria_35_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8008..8181)
DNA (174bp) protein (58aa)
Two component regulator propeller domain protein id=4663530 bin=GWA2_Ignavibacteria-rel_35_8 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
BNR/Asp-box repeat-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8181..8864)
DNA (684bp) protein (228aa)
hypothetical protein id=4853652 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8855..9031)
DNA (177bp) protein (59aa)
hypothetical protein id=4853653 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(9040..9504)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=2195288 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Putative uncharacterized protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

9941..11671
DNA (1731bp) protein (577aa)
recJ; ssDNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Single-stranded DNA-specific exonuclease id=2195286 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
single-stranded-DNA-specific exonuclease RecJ
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11658..15032
DNA (3375bp) protein (1125aa)
DEAD/DEAH box helicase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative uncharacterized protein id=2195284 bin=GWB2_Ignavibacteria_35_12 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DEAD/DEAH box helicase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(15145..15387)
DNA (243bp) protein (81aa)
Uncharacterized protein id=2195282 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

15908..16852
DNA (945bp) protein (315aa)
Methyltransferase type 11 id=2195280 bin=GWB2_Ignavibacteria_35_12 species=Methanotorris formicicus genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Methyltransferase type 11 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

16987..18393
DNA (1407bp) protein (469aa)
Putative oligosaccharide repeat unit transporter id=2195278 bin=GWB2_Ignavibacteria_35_12 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
putative oligosaccharide repeat unit transporter Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
polysaccharide biosynthesis protein
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

18390..18482
DNA (93bp) protein (31aa)
hypothetical protein id=2195276 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18531..19514)
DNA (984bp) protein (328aa)
tRNA-dihydrouridine synthase id=2195274 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
dusB; tRNA-dihydrouridine synthase B Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
dusB; tRNA-dihydrouridine synthase B
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_23
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

19786..20370
DNA (585bp) protein (195aa)
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative 3-methyladenine DNA glycosylase id=2195272 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
3-methyladenine DNA glycosylase
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

20501..21670
DNA (1170bp) protein (390aa)
hypothetical protein id=4853663 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_25
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

21896..22225
DNA (330bp) protein (110aa)
hypothetical protein id=2195268 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GWA2_Ignavibacteria-rel_35_8_gwa2_scaffold_6484_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

22314..22991
DNA (678bp) protein (226aa)
Uncharacterized protein id=2195267 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
Displaying 26 items

View Taxonomy