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GWA2_NC10X_70_23_gwa2_scaffold_13970

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_NC10X_70_23_gwa2_scaffold_13970_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..429
DNA (429bp) protein (143aa)
plasmid pRiA4b ORF-3 family protein Tax=GWA2_Rokubacteria_70_23_curated
Plasmid pRiA4b ORF-3 family protein id=4464962 bin=GWC2_Deltaproteobacteria_56_8 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
plasmid pRiA4b ORF-3 family protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

494..1546
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AZH6_9ZZZZ
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2005..2448
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036489CB
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2635..2919)
DNA (285bp) protein (95aa)
Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_13970_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3164..4864
DNA (1701bp) protein (567aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_S02329 Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_13970_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5856..6530
DNA (675bp) protein (225aa)
GntR family transcriptional regulator n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J7B6_9BURK
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=GWA2_Rokubacteria_70_23_curated
GntR family transcriptional regulator
GWA2_NC10X_70_23_gwa2_scaffold_13970_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6566..7822
DNA (1257bp) protein (419aa)
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=GWA2_Rokubacteria_70_23_curated
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] id=14625832 bin=bin7_NC10_sister species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7834..8940
DNA (1107bp) protein (369aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037E9813
alanine racemase
GWA2_NC10X_70_23_gwa2_scaffold_13970_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8982..9821
DNA (840bp) protein (280aa)
glnH; glutamine-binding protein GlnH Tax=GWA2_Rokubacteria_70_23_curated
Glutamine-binding protein GlnH id=4308841 bin=GWC2_Methylomirabilis_70_24 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glnH; glutamine-binding protein GlnH
GWA2_NC10X_70_23_gwa2_scaffold_13970_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9890..10540
DNA (651bp) protein (217aa)
polar amino acid ABC transporter inner membrane subunit Tax=GWA2_Rokubacteria_70_23_curated
Polar amino acid ABC transporter, inner membrane subunit id=4308842 bin=GWC2_Methylomirabilis_70_24 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
polar amino acid ABC transporter inner membrane subunit
GWA2_NC10X_70_23_gwa2_scaffold_13970_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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10556..11212
DNA (657bp) protein (219aa)
Putative glutamine ABC transporter permease protein GlnM id=4308843 bin=GWC2_Methylomirabilis_70_24 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glnM; glutamine ABC transporter permease GlnM Tax=GWA2_Rokubacteria_70_23_curated
glnM; glutamine ABC transporter permease GlnM
GWA2_NC10X_70_23_gwa2_scaffold_13970_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11209..11964
DNA (756bp) protein (252aa)
Amino acid ABC transporter ATP-binding protein id=4308844 bin=GWC2_Methylomirabilis_70_24 species=Nocardia brasiliensis genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid ABC transporter ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
amino acid ABC transporter ATP-binding protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11990..12901
DNA (912bp) protein (304aa)
branched chain amino acid aminotransferase apoenzyme; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWA2_Rokubacteria_70_23_curated
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain amino acid aminotransferase id=4308845 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_13970_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13419..18347)
DNA (4929bp) protein (1643aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=2355493 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas psychrotolerans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18356..18562
DNA (207bp) protein (69aa)
Uncharacterized protein id=3956792 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18586..19806)
DNA (1221bp) protein (407aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4953984 bin=GWC2_Methylomirabilis_70_16 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19793..20116)
DNA (324bp) protein (108aa)
Uncharacterized protein id=3956796 bin=GWF2_Methylomirabilis_70_14 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20420..22270
DNA (1851bp) protein (617aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3956798 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22371..23768
DNA (1398bp) protein (466aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3956798 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23953..24264
DNA (312bp) protein (104aa)
id=3956800 Tax=GWA2_Rokubacteria_70_23_curated
id=3956800 bin=GWF2_Methylomirabilis_70_14 species=Leptospira weilii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_13970_trna_2
unknown

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comp(24655..24727)
DNA (73bp)
transferRNA
GWA2_NC10X_70_23_gwa2_scaffold_13970_trna_1
unknown

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comp(24752..24822)
DNA (71bp)
transferRNA
GWA2_NC10X_70_23_gwa2_scaffold_13970_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25036..25308)
DNA (273bp) protein (91aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=GWA2_Rokubacteria_70_23_curated
Histone family protein DNA-binding protein id=4493677 bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hup; SPBc2 prophage-derived DNA-binding protein HU 2
GWA2_NC10X_70_23_gwa2_scaffold_13970_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25348..25572)
DNA (225bp) protein (75aa)
GAF sensor hybrid histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
GAF sensor hybrid histidine kinase id=4493679 bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWA2_NC10X_70_23_gwa2_scaffold_13970_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25636..26145
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=4731536 bin=GWC2_Methylomirabilis_70_24 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_13970_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26156..27613
DNA (1458bp) protein (486aa)
UbiD family decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=GWA2_Rokubacteria_70_23_curated
UbiD family decarboxylase id=4731535 bin=GWC2_Methylomirabilis_70_24 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UbiD family decarboxylase
GWA2_NC10X_70_23_gwa2_scaffold_13970_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

27774..28622
DNA (849bp) protein (283aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWA2_Rokubacteria_70_23_curated
4-hydroxybenzoate polyprenyltransferase id=4731534 bin=GWC2_Methylomirabilis_70_24 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
4-hydroxybenzoate polyprenyltransferase
GWA2_NC10X_70_23_gwa2_scaffold_13970_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

28619..28771
DNA (153bp) protein (51aa)
Putative ubiE/COQ5 methyltransferase family protein id=4731533 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_008B14 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Putative ubiE/COQ5 methyltransferase family protein Tax=GWA2_Rokubacteria_70_23_curated
Displaying 28 items

View Taxonomy