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GWA2_NC10X_70_23_gwa2_scaffold_3331

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_NC10X_70_23_gwa2_scaffold_3331_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..383)
DNA (381bp) protein (127aa)
Uncharacterized protein family UPF0079, ATPase id=3047190 bin=GWF2_Methylomirabilis_70_14 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(380..1924)
DNA (1545bp) protein (515aa)
Putative uncharacterized protein yjeF id=4870784 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
yjeF; carbohydrate kinase Tax=GWA2_Rokubacteria_70_23_curated
yjeF; carbohydrate kinase
GWA2_NC10X_70_23_gwa2_scaffold_3331_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1927..2721)
DNA (795bp) protein (265aa)
id=4870785 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4870785 Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_3331_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2699..3118)
DNA (420bp) protein (140aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=GWA2_Rokubacteria_70_23_curated
Holo-[acyl-carrier-protein] synthase id=3047193 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
holo-acyl-carrier-protein synthase
GWA2_NC10X_70_23_gwa2_scaffold_3331_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3115..4467)
DNA (1353bp) protein (451aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=GWA2_Rokubacteria_70_23_curated
Phosphoglucosamine mutase id=4870787 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glmM; phosphoglucosamine mutase
GWA2_NC10X_70_23_gwa2_scaffold_3331_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4464..4877)
DNA (414bp) protein (138aa)
YbbR-like id=4870788 bin=GWC2_Methylomirabilis_70_24 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4874..5731)
DNA (858bp) protein (286aa)
Putative uncharacterized protein id=3047309 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5703..6554)
DNA (852bp) protein (284aa)
Dihydropteroate synthase id=4870790 bin=GWC2_Methylomirabilis_70_24 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dihydropteroate synthase Tax=GWA2_Rokubacteria_70_23_curated
dihydropteroate synthase
GWA2_NC10X_70_23_gwa2_scaffold_3331_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6953..8767)
DNA (1815bp) protein (605aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) Tax=GWA2_Rokubacteria_70_23_curated
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=4870791 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_3331_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8808..9344)
DNA (537bp) protein (179aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=GWA2_Rokubacteria_70_23_curated
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase id=4870792 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_3331_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9375..10013)
DNA (639bp) protein (213aa)
Uncharacterized protein id=4870793 bin=GWC2_Methylomirabilis_70_24 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sporulation protein Tax=GWA2_Rokubacteria_70_23_curated
sporulation protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(10159..11826)
DNA (1668bp) protein (556aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) Tax=GWA2_Rokubacteria_70_23_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=2810468 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_3331_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11928..12179)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FB50_DESAA
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12176..12619)
DNA (444bp) protein (148aa)
Hypothetical conserved protein id=2810464 bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Hypothetical conserved protein Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_3331_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12607..12891)
DNA (285bp) protein (95aa)
cobyric acid synthase CobQ; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=GWA2_Rokubacteria_70_23_curated
Cobyric acid synthase id=2810460 bin=GWF2_Methylomirabilis_70_14 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobyric acid synthase CobQ
GWA2_NC10X_70_23_gwa2_scaffold_3331_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12888..13799)
DNA (912bp) protein (304aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=GWA2_Rokubacteria_70_23_curated
Cobalamin biosynthesis protein CobD id=4820075 bin=GWC2_Methylomirabilis_70_16 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cobalamin biosynthesis protein CobD
GWA2_NC10X_70_23_gwa2_scaffold_3331_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13811..14812)
DNA (1002bp) protein (334aa)
TonB family protein; K03832 periplasmic protein TonB Tax=GWA2_Rokubacteria_70_23_curated
TonB family protein id=2810447 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TonB family protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14809..15462)
DNA (654bp) protein (218aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Adenosylcobinamide amidohydrolase family protein id=2810444 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenosylcobinamide amidohydrolase
GWA2_NC10X_70_23_gwa2_scaffold_3331_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15473..17362)
DNA (1890bp) protein (630aa)
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel id=2810438 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
btuB; TonB-dependent outer membrane receptor for cobalamin and Fe transport; K02014 iron complex outermembrane recepter protein Tax=GWA2_Rokubacteria_70_23_curated
btuB; cobalamin uptake ligand-gated TonB-dependent outer membrane channel
GWA2_NC10X_70_23_gwa2_scaffold_3331_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17635..18465)
DNA (831bp) protein (277aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWA2_Rokubacteria_70_23_curated
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-)
Iron-enterobactin transporter ATP-binding protein id=4417586 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_3331_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18462..19481)
DNA (1020bp) protein (340aa)
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Vitamin B12 import system, permease protein BtuC id=4417585 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
btuC; vitamin B12 import system permease protein BtuC
GWA2_NC10X_70_23_gwa2_scaffold_3331_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19696..20691)
DNA (996bp) protein (332aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Periplasmic binding protein id=4417584 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
periplasmic binding protein
GWA2_NC10X_70_23_gwa2_scaffold_3331_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20688..21491)
DNA (804bp) protein (268aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (anaerobic pathway of cobalamin biosynthesis, cobT) (EC:2.4.2.21) Tax=GWA2_Rokubacteria_70_23_curated
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (anaerobic pathway of cobalamin biosynthesis, cobT) (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase id=4417583 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying 23 items

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