ggKbase home page

GWA2_NC10X_70_23_gwa2_scaffold_1955

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_NC10X_70_23_gwa2_scaffold_1955_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27..1058)
DNA (1032bp) protein (344aa)
theronine dehydrogenase-like Zn-dependent dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
Theronine dehydrogenase-like Zn-dependent dehydrogenase id=3917285 bin=GWC2_Methylomirabilis_70_24 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
theronine dehydrogenase-like Zn-dependent dehydrogenase
GWA2_NC10X_70_23_gwa2_scaffold_1955_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1055..2065)
DNA (1011bp) protein (337aa)
alcohol dehydrogenase (EC:1.1.1.1) Tax=GWA2_Rokubacteria_70_23_curated
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase GroES domain protein id=3917292 bin=GWC2_Methylomirabilis_70_24 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_1955_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2127..3014)
DNA (888bp) protein (296aa)
crtB; phytoene synthase (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32] Tax=GWA2_Rokubacteria_70_23_curated
crtB; phytoene synthase (EC:2.5.1.32)
Phytoene synthase id=3818227 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_1955_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3011..4024)
DNA (1014bp) protein (338aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=GWA2_Rokubacteria_70_23_curated
Hopanoid-associated sugar epimerase id=3917296 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hpnA; NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
GWA2_NC10X_70_23_gwa2_scaffold_1955_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4036..4743)
DNA (708bp) protein (236aa)
Putative uncharacterized protein id=3917298 bin=GWC2_Methylomirabilis_70_24 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nucleoside phosphorylase Tax=GWA2_Rokubacteria_70_23_curated
nucleoside phosphorylase
GWA2_NC10X_70_23_gwa2_scaffold_1955_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4748..5080)
DNA (333bp) protein (111aa)
Putative uncharacterized protein id=3917300 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5082..6098)
DNA (1017bp) protein (339aa)
radical SAM family Fe-S protein Tax=GWA2_Rokubacteria_70_23_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6518..8476
DNA (1959bp) protein (653aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=GWA2_Rokubacteria_70_23_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=3917306 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_1955_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8473..9279
DNA (807bp) protein (269aa)
Toluene tolerance protein Ttg2B id=3917308 bin=GWC2_Methylomirabilis_70_24 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
toluene tolerance protein Ttg2B; K02066 putative ABC transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
toluene tolerance protein Ttg2B
GWA2_NC10X_70_23_gwa2_scaffold_1955_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9276..10022
DNA (747bp) protein (249aa)
Putative ABC transporter (ATP-binding protein) id=3818240 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10433..10873
DNA (441bp) protein (147aa)
ABC transporter, periplasmic substrate-binding protein, MCE family; K02067 putative ABC transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Mce-related protein id=4350124 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter substrate-binding lipoprotein
GWA2_NC10X_70_23_gwa2_scaffold_1955_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10900..12351
DNA (1452bp) protein (484aa)
outer membrane efflux protein Tax=GWA2_Rokubacteria_70_23_curated
Outer membrane efflux protein, putative id=4396477 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane efflux protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12348..12998
DNA (651bp) protein (217aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4350121 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13306..14046
DNA (741bp) protein (247aa)
Putative Sugar nucleotidyltransferase id=4870478 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative sugar nucleotidyltransferase Tax=GWA2_Rokubacteria_70_23_curated
putative sugar nucleotidyltransferase
GWA2_NC10X_70_23_gwa2_scaffold_1955_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14048..15238
DNA (1191bp) protein (397aa)
Uncharacterized protein id=4870479 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
membrane protein Tax=GWA2_Rokubacteria_70_23_curated
membrane protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15265..16284
DNA (1020bp) protein (340aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4870480 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16400..17473
DNA (1074bp) protein (358aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=GWA2_Rokubacteria_70_23_curated
Myo-inositol-1-phosphate synthase id=4870508 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
myo-inositol-1-phosphate synthase
GWA2_NC10X_70_23_gwa2_scaffold_1955_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17588..20332
DNA (2745bp) protein (915aa)
Uncharacterized protein id=4870509 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Protein export membrane protein, SecD/SecF family Tax=GWA2_Rokubacteria_70_23_curated
Protein export membrane protein, SecD/SecF family
GWA2_NC10X_70_23_gwa2_scaffold_1955_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20329..21042
DNA (714bp) protein (238aa)
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4870510 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=GWA2_Rokubacteria_70_23_curated
HAD-superfamily hydrolase, subfamily IA, variant 3
GWA2_NC10X_70_23_gwa2_scaffold_1955_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21039..21770
DNA (732bp) protein (244aa)
Putative Nucleotidyl transferase id=4870511 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Nucleotidyl transferase Tax=GWA2_Rokubacteria_70_23_curated
Nucleotidyl transferase
GWA2_NC10X_70_23_gwa2_scaffold_1955_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21767..22606
DNA (840bp) protein (280aa)
Uncharacterized protein id=4870512 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22666..23931
DNA (1266bp) protein (422aa)
aminotransferase (EC:2.6.1.-) Tax=GWA2_Rokubacteria_70_23_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase id=4396514 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_1955_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23960..25018
DNA (1059bp) protein (353aa)
Oxidoreductase domain protein Tax=GWA2_Rokubacteria_70_23_curated
Putative Oxidoreductase domain protein id=4870514 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Oxidoreductase domain protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25021..26214
DNA (1194bp) protein (398aa)
Uncharacterized protein id=4870515 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
membrane protein Tax=GWA2_Rokubacteria_70_23_curated
membrane protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26211..27899)
DNA (1689bp) protein (563aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=GWA2_Rokubacteria_70_23_curated
malate synthase A (EC:2.3.3.9)
Malate synthase id=4870516 bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_1955_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27954..28766)
DNA (813bp) protein (271aa)
Putative 2-oxoglutarate-Fe(II) oxygenase superfamily id=4870517 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative 2-oxoglutarate-Fe(II) oxygenase superfamily Tax=GWA2_Rokubacteria_70_23_curated
putative 2-oxoglutarate-Fe(II) oxygenase superfamily
GWA2_NC10X_70_23_gwa2_scaffold_1955_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(28756..28878)
DNA (123bp) protein (41aa)
id=4870518 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4870518 Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_1955_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

28916..30184
DNA (1269bp) protein (423aa)
Major facilitator superfamily MFS_1 id=3030704 bin=GWF2_Methylomirabilis_70_14 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_70_23_curated
major facilitator superfamily protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

30192..31463
DNA (1272bp) protein (424aa)
Major facilitator superfamily MFS_1 id=4870520 bin=GWC2_Methylomirabilis_70_24 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
major facilitator superfamily protein Tax=GWA2_Rokubacteria_70_23_curated
major facilitator superfamily protein
GWA2_NC10X_70_23_gwa2_scaffold_1955_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(31689..32117)
DNA (429bp) protein (143aa)
id=4870521 Tax=GWA2_Rokubacteria_70_23_curated
id=4870521 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying items 1-30 of 36 in total

View Taxonomy