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GWA2_NC10X_70_23_gwa2_scaffold_17146

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_NC10X_70_23_gwa2_scaffold_17146_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..351)
DNA (351bp) protein (117aa)
cobU; adenosylcobinamide kinase (EC:2.7.1.156 2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=GWA2_Rokubacteria_70_23_curated
cobU; adenosylcobinamide kinase (EC:2.7.1.156 2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase id=2810412 bin=GWF2_Methylomirabilis_70_14 species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_17146_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(602..2419)
DNA (1818bp) protein (606aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein SpalD1_18615 id=2810406 bin=GWF2_Methylomirabilis_70_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2606..2971)
DNA (366bp) protein (122aa)
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=2810404 bin=GWF2_Methylomirabilis_70_14 species=Aeromicrobium marinum genus=Aeromicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA-binding S4 domain-containing protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3066..3773
DNA (708bp) protein (236aa)
Uncharacterized protein id=2810396 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3799..4218
DNA (420bp) protein (140aa)
hypothetical protein; K15977 putative oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
Bll6552 protein id=4820063 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4229..5200)
DNA (972bp) protein (324aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit Tax=GWA2_Rokubacteria_70_23_curated
Pyruvate dehydrogenase (Acetyl-transferring) id=4243818 bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
GWA2_NC10X_70_23_gwa2_scaffold_17146_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5289..6335)
DNA (1047bp) protein (349aa)
pyruvate dehydrogenase (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWA2_Rokubacteria_70_23_curated
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) id=3786486 bin=GWC2_Methylomirabilis_70_24 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_17146_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6403..7275)
DNA (873bp) protein (291aa)
ABC-type transporter, permease component: PepT family id=3786485 bin=GWC2_Methylomirabilis_70_24 species=Alcanivorax dieselolei genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppC; PepT family ABC transporter permease Tax=GWA2_Rokubacteria_70_23_curated
dppC; PepT family ABC transporter permease
GWA2_NC10X_70_23_gwa2_scaffold_17146_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7238..8188)
DNA (951bp) protein (317aa)
ABC transporter permease id=3786404 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppB3; PepT family ABC transporter permease Tax=GWA2_Rokubacteria_70_23_curated
dppB3; PepT family ABC transporter permease
GWA2_NC10X_70_23_gwa2_scaffold_17146_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8213..9838)
DNA (1626bp) protein (542aa)
dipeptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Hemin-binding lipoprotein id=4243810 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9911..10543)
DNA (633bp) protein (211aa)
phosphoglycerate mutase (EC:5.4.2.1); K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=GWA2_Rokubacteria_70_23_curated
phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase id=4243808 bin=GWF2_Methylomirabilis_70_14 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_17146_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10588..11334)
DNA (747bp) protein (249aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=GWA2_Rokubacteria_70_23_curated
Cobalamin synthase id=4243806 bin=GWF2_Methylomirabilis_70_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobS: cobalamin 5'-phosphate synthase
GWA2_NC10X_70_23_gwa2_scaffold_17146_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11357..11764)
DNA (408bp) protein (136aa)
Uncharacterized protein id=4243675 bin=GWF2_Methylomirabilis_70_14 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11754..12017)
DNA (264bp) protein (88aa)
DNA polymerase beta domain protein region Tax=GWA2_Rokubacteria_70_23_curated
DNA polymerase beta domain protein region id=4243673 bin=GWF2_Methylomirabilis_70_14 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase beta domain protein region
GWA2_NC10X_70_23_gwa2_scaffold_17146_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12144..13667)
DNA (1524bp) protein (508aa)
Putative propionyl-CoA carboxylase beta subunit id=4243671 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
propionyl-CoA carboxylase subunit beta Tax=GWA2_Rokubacteria_70_23_curated
propionyl-CoA carboxylase subunit beta
GWA2_NC10X_70_23_gwa2_scaffold_17146_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13675..13938)
DNA (264bp) protein (88aa)
Putative uncharacterized protein id=4207263 bin=GWC2_Methylomirabilis_70_24 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_17146_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14194..14433)
DNA (240bp) protein (80aa)
Uncharacterized protein id=4243668 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
protein of unknown function DUF433
GWA2_NC10X_70_23_gwa2_scaffold_17146_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14465..15577)
DNA (1113bp) protein (371aa)
RNA polymerase sigma-E factor Tax=GWA2_Rokubacteria_70_23_curated
RNA polymerase sigma-E factor id=4243667 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma factor
GWA2_NC10X_70_23_gwa2_scaffold_17146_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15709..16218)
DNA (510bp) protein (170aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=GWA2_Rokubacteria_70_23_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=4243666 bin=GWF2_Methylomirabilis_70_14 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWA2_NC10X_70_23_gwa2_scaffold_17146_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16300..16542
DNA (243bp) protein (81aa)
id=4207271 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4207271 Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_17146_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16725..17294
DNA (570bp) protein (190aa)
UPI0001925A99 related cluster id=4207272 bin=GWC2_Methylomirabilis_70_24 species=Emiliania huxleyi genus=Emiliania taxon_order=Isochrysidales taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uncharacterized LOC100208015 Tax=GWA2_Rokubacteria_70_23_curated
surface protein PspC
GWA2_NC10X_70_23_gwa2_scaffold_17146_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17507..17977)
DNA (471bp) protein (157aa)
UPI0001758650 related cluster id=4207273 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UPI0001758650 related cluster Tax=GWA2_Rokubacteria_70_23_curated
GWA2_NC10X_70_23_gwa2_scaffold_17146_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18069..18251)
DNA (183bp) protein (61aa)
Phage integrase family protein id=4207274 bin=GWC2_Methylomirabilis_70_24 species=Rhodococcus triatomae genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Phage integrase family protein Tax=GWA2_Rokubacteria_70_23_curated
Displaying 23 items

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