ggKbase home page

GWA2_NC10X_70_23_gwa2_scaffold_6903

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_NC10X_70_23_gwa2_scaffold_6903_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3..1025
DNA (1023bp) protein (341aa)
dipeptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type dipeptide transport system, periplasmic component id=2654072 bin=GWC2_Methylomirabilis_70_24 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dipeptide ABC transporter substrate-binding protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1022..2947
DNA (1926bp) protein (642aa)
two component system sensor histidine kinase (EC:2.7.13.3) Tax=GWA2_Rokubacteria_70_23_curated
two component system sensor histidine kinase (EC:2.7.13.3)
Two component system sensor histidine kinase id=2654076 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_6903_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2940..3317
DNA (378bp) protein (126aa)
Two component, sigma-54 specific, transcriptional regulator, Fis family id=2654080 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
two component sigma-54 specific Fis family transcriptional regulator Tax=GWA2_Rokubacteria_70_23_curated
two component sigma-54 specific Fis family transcriptional regulator
GWA2_NC10X_70_23_gwa2_scaffold_6903_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3310..4893
DNA (1584bp) protein (528aa)
multi-sensor hybrid histidine kinase id=2654082 bin=GWC2_Methylomirabilis_70_24 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor hybrid histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
PAS sensor protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4984..5928
DNA (945bp) protein (315aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4547727 bin=GWF2_Methylomirabilis_70_14 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6117..7109
DNA (993bp) protein (331aa)
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45); K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=GWA2_Rokubacteria_70_23_curated
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Putative TIM-barrel fold metal-dependent hydrolase id=2654086 bin=GWC2_Methylomirabilis_70_24 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWA2_NC10X_70_23_gwa2_scaffold_6903_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7125..8102
DNA (978bp) protein (326aa)
D-3-phosphoglycerate dehydrogenase id=2654089 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lactate dehydrogenase-like oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
lactate dehydrogenase-like oxidoreductase
GWA2_NC10X_70_23_gwa2_scaffold_6903_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8110..8964
DNA (855bp) protein (285aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=2654094 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter membrane protein 1, HAAT family
GWA2_NC10X_70_23_gwa2_scaffold_6903_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8964..9905
DNA (942bp) protein (314aa)
ABC-type transporter, integral membrane subunit id=2654099 bin=GWC2_Methylomirabilis_70_24 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid ABC transporter Tax=GWA2_Rokubacteria_70_23_curated
amino acid ABC transporter
GWA2_NC10X_70_23_gwa2_scaffold_6903_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9912..10661
DNA (750bp) protein (250aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=2654104 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
GWA2_NC10X_70_23_gwa2_scaffold_6903_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10661..11356
DNA (696bp) protein (232aa)
ABC transporter related id=2654110 bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter-like protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter-like protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11407..12645
DNA (1239bp) protein (413aa)
Extracellular ligand-binding receptor id=2654115 bin=GWC2_Methylomirabilis_70_24 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor
GWA2_NC10X_70_23_gwa2_scaffold_6903_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12653..13567
DNA (915bp) protein (305aa)
Tartronate semialdehyde reductase id=2654120 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-hydroxy-3-oxopropionate reductase Tax=GWA2_Rokubacteria_70_23_curated
2-hydroxy-3-oxopropionate reductase
GWA2_NC10X_70_23_gwa2_scaffold_6903_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14171..14371
DNA (201bp) protein (67aa)
hypothetical protein; K09803 hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3033670 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14352..14684
DNA (333bp) protein (111aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4547680 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14808..15044
DNA (237bp) protein (79aa)
molecular chaperone Tir n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B623E3
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15041..15586
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000366D416
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17389..18333
DNA (945bp) protein (315aa)
HNH endonuclease Tax=GWA2_Rokubacteria_70_23_curated
HNH endonuclease id=4355653 bin=GWF2_Methylomirabilis_70_14 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HNH endonuclease
GWA2_NC10X_70_23_gwa2_scaffold_6903_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19027..20523)
DNA (1497bp) protein (499aa)
Oligopeptide ABC transporter substrate-binding protein id=3334459 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
oligopeptide ABC transporter substrate-binding protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20520..21503)
DNA (984bp) protein (328aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_70_23_curated
Uroporphyrinogen decarboxylase id=3334462 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uroporphyrinogen decarboxylase
GWA2_NC10X_70_23_gwa2_scaffold_6903_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21603..21821)
DNA (219bp) protein (73aa)
Response regulator receiver protein id=3334464 bin=GWC2_Methylomirabilis_70_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator receiver protein Tax=GWA2_Rokubacteria_70_23_curated
response regulator receiver protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21911..24061
DNA (2151bp) protein (717aa)
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=3334469 bin=GWC2_Methylomirabilis_70_24 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative Acetyl-CoA synthetase
GWA2_NC10X_70_23_gwa2_scaffold_6903_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24753..25802
DNA (1050bp) protein (350aa)
lipoprotein Tax=GWA2_Rokubacteria_70_23_curated
Putative lipoprotein id=4355658 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipoprotein
GWA2_NC10X_70_23_gwa2_scaffold_6903_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25817..26341)
DNA (525bp) protein (175aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=3334479 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWA2_NC10X_70_23_gwa2_scaffold_6903_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26541..30017
DNA (3477bp) protein (1159aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=GWA2_Rokubacteria_70_23_curated
Ribonucleotide reductase family protein id=4355660 bin=GWF2_Methylomirabilis_70_14 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribonucleotide-diphosphate reductase subunit alpha
Displaying 25 items

View Taxonomy