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FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta

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Displaying items 1-30 of 156 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_1
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..226)
DNA (225bp) protein (75aa)
integrase catalytic subunit id=15192219 bin=GWC2_NOV_55_46 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABM18314.1}; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 /; VT8).;"
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_2
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377..694)
DNA (318bp) protein (106aa)
id=4841576 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_3
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1020..1253)
DNA (234bp) protein (78aa)
id=4841577 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_4
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1401..1685)
DNA (285bp) protein (95aa)
Transcriptional dual regulator HU-beta id=4841578 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hupB; transcriptional dual regulator HU-beta
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_5
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1842..1931)
DNA (90bp) protein (30aa)
id=4841579 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_6
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1943..2698)
DNA (756bp) protein (252aa)
id=4841580 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_7
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2725..2928)
DNA (204bp) protein (68aa)
id=4841581 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_8
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3020..3649)
DNA (630bp) protein (210aa)
id=4841582 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_9
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3935..4408
DNA (474bp) protein (158aa)
id=4841583 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_10
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..5175
DNA (741bp) protein (247aa)
id=4841584 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_11
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5347..6519
DNA (1173bp) protein (391aa)
Uncharacterized protein id=4841612 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Entamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
antigen p83/100
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_12
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6918..8387
DNA (1470bp) protein (490aa)
Resolvase id=4841614 bin=GWC2_Deltaproteobacteria_55_46 species=Nitrobacter winogradskyi genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
resolvase rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_13
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8656..9876
DNA (1221bp) protein (407aa)
Site-specific recombinase XerD id=4841615 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
integrase family protein rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_14
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9880..10548
DNA (669bp) protein (223aa)
id=4841616 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_15
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10644..10886
DNA (243bp) protein (81aa)
Uncharacterized protein id=4841617 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_16
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10888..13161
DNA (2274bp) protein (758aa)
Phage/plasmid primase, P4 family, C-terminal domain protein id=4841618 bin=GWC2_Deltaproteobacteria_55_46 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
DNA-primase, phage/plasmid primase rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_17
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13841..14389
DNA (549bp) protein (183aa)
Putative uncharacterized protein id=4841620 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Wolbachia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_18
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14476..15183
DNA (708bp) protein (236aa)
id=4841621 bin=GWC2_Deltaproteobacteria_55_46 species=Sphingomonas sp. MM-1 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_19
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15184..15606
DNA (423bp) protein (141aa)
id=4841622 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_20
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15629..15778
DNA (150bp) protein (50aa)
id=4841623 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_21
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15840..16061
DNA (222bp) protein (74aa)
id=4841624 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_trna_3
unknown

Not on your lists

comp(16680..16750)
DNA (71bp)
transferRNA Gln
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_22
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16867..17391
DNA (525bp) protein (175aa)
Zinc finger protein id=4841625 bin=GWC2_Deltaproteobacteria_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
zinc finger protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_23
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17481..17666
DNA (186bp) protein (62aa)
50S ribosomal protein L32 id=4841626 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
rpmF; 50S ribosomal protein L32
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_24
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17762..18796
DNA (1035bp) protein (345aa)
Phosphate acyltransferase id=4841627 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
putative glycerol-3-phosphate acyltransferase PlsX rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_25
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18800..19771
DNA (972bp) protein (324aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=4841628 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_26
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19814..20755
DNA (942bp) protein (314aa)
Malonyl CoA-acyl carrier protein transacylase id=4841629 bin=GWC2_Deltaproteobacteria_55_46 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
malonyl CoA-acyl carrier protein transacylase rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_27
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20788..21528
DNA (741bp) protein (247aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100) rbh
3-oxoacyl-(Acyl-carrier-protein) reductase id=4841630 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_28
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21628..21864
DNA (237bp) protein (79aa)
Acyl carrier protein id=4841631 bin=GWC2_Deltaproteobacteria_55_46 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
acpP; acyl carrier protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
FINAL_GWC2_NOV_55_46_C10_start_end_TN_INT.fasta_29
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21967..23202
DNA (1236bp) protein (412aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=4841632 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
3-oxoacyl-ACP synthase rbh
Tax=GWC2_Deltaproteobacteria_55_46b_curated
Displaying items 1-30 of 156 in total

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